AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g03542 | ATGGCTACACAATTGAATCCATCATCTTCCACCACCACCACCTTAATCTCACCTTCTTCATTCAATCAACAATCTGTTAAAAACATTTCAACAAAATCAAGATTGGTTTTCAAGATTCAGTCAAATTTCAACCAAAAAAAACAATTTGAACTTAAGTCCTCAAATGGGTATCCTCTTAATGCTGTTTCTTTGCATGATGGTGCAGCAGAAAAGCCTCTAGCAAAAGAAACTGTAGTATTACCAGAACAAACCGAAACAAATCTTAGTGTGACGGTTGTGGGTGCTTCAGGCGATCTTGCTAAGAAAAAGATATTCCCTGCCCTTTTTGCTCTCTTTTATGAGGGCTGTTTACCACAGAATTTTACTATATTTGGTTATGCTCGAACCAAAATGACCGATGAGGAGCTGAGGGAAATGATTAGTAGAACATTAACTTGCAGAATTGATAAGAGGGAAAACTGTGGTGACAAAATGGAAGAGTTTCTTAATAGATGCTTTTACCATTCGGGTCAATACGGGTCTGAGGAAAATTTTGCAGAATTAGACACTAAGCTAAAACAGAAAGAGGGCGGAAAATCGCCGAATAGGTTGTTTTACTTGTCAATACCTCCGGACATTTTTGTGGATGTAGTACGTTATGCAAGTGAAAGAGCTTCTTCTAAAATCTGGGTGGACACGGGTGATAGTCGAGAAACCATTCGGGCAATTGATCATTATTTGGGAAAGGAGCTCGTGGAGAATCTATCAGTTCTTCGTTTCTCAAATCTTGTTTTTGAACCACTTTGGTCAAGAAACTACATTCGCAGTGTACAATTCATATTTTCAGAAGACTTTGGTACAGAAGGACGAGGAGGTTACTTTAACAACTATGGAATCATTCGCGATATAATGCAAAACCACCTTCTGCAAATATTAGCATTGTTTGCAATGGAAACACCTGTTAGTTTAGACGCCGAGGACATTAGAAATGAAAAGGTCAAAGTTTTGAGGTCAATGAGACAACTTAAACTCGAAGATGTAGTTGTCGGTCAATATAAGGGGCATAGCAAGGGGGGAAAGACGTTTTCAGGATACACAGAGGACCCGACTGTCCCAAACGATAGCATCACTCCAACTTTTGCAGCAGCAGCACTTTTTATTGATAATGCTCGGTGGGATGGTGTTCCTTTCCTCATGAAAGCTGGAAAGGCCCTGAATACTAGACGGGCGGAGATCAGAGTTCAATTCAGACATGTTCCAGGTAACCTGTATAAACGAAACTTTGGGACAGATATGGACAAAGCTACAAACGAACTTGTGCTTCGTGTGCAGCCCAATGAAGCCATATTTCTTAAAATCAATAACAAGATCCCTGGTCTTGGTATGAGGCTCGACAGAAGTGACCTTAATTTGCTCTACAGTACGAGATATCCAAAGGAAATACCGGATGCATACGAGAGGCTTTTATTGGACGCGATAGAAGGAGAAAGGAGATTGTTTATAAGAAGTGATGAGCTTGATGCTGCATGGTCTATATTTACCCCATTGTTGAAAGAACTTGAGTCTAACAAGATTGCACCGGAGTTATATCCATATGGTAGTAGAGGACCAGTTGGAGCTCATTATCTGGCTGCAAAATACAATGTCCGGTGGGGTGATCTTGCGGGCGATGACTAA | 1656 | 40.52 | MATQLNPSSSTTTTLISPSSFNQQSVKNISTKSRLVFKIQSNFNQKKQFELKSSNGYPLNAVSLHDGAAEKPLAKETVVLPEQTETNLSVTVVGASGDLAKKKIFPALFALFYEGCLPQNFTIFGYARTKMTDEELREMISRTLTCRIDKRENCGDKMEEFLNRCFYHSGQYGSEENFAELDTKLKQKEGGKSPNRLFYLSIPPDIFVDVVRYASERASSKIWVDTGDSRETIRAIDHYLGKELVENLSVLRFSNLVFEPLWSRNYIRSVQFIFSEDFGTEGRGGYFNNYGIIRDIMQNHLLQILALFAMETPVSLDAEDIRNEKVKVLRSMRQLKLEDVVVGQYKGHSKGGKTFSGYTEDPTVPNDSITPTFAAAALFIDNARWDGVPFLMKAGKALNTRRAEIRVQFRHVPGNLYKRNFGTDMDKATNELVLRVQPNEAIFLKINNKIPGLGMRLDRSDLNLLYSTRYPKEIPDAYERLLLDAIEGERRLFIRSDELDAAWSIFTPLLKELESNKIAPELYPYGSRGPVGAHYLAAKYNVRWGDLAGDD | 551 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g03542 | 551 | PIRSF | G6PD | 228 | 548 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | PIRSF | G6PD | 76 | 226 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | FunFam | Glucose-6-phosphate 1-dehydrogenase | 236 | 545 | - | - | |
| Cind3g03542 | 551 | SUPERFAMILY | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 237 | 544 | - | - | |
| Cind3g03542 | 551 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 82 | 250 | IPR036291 | - | |
| Cind3g03542 | 551 | NCBIfam | glucose-6-phosphate dehydrogenase | 232 | 545 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | PANTHER | GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD | 232 | 543 | IPR001282 | GO:0004345(PANTHER)|GO:0006006(PANTHER)|GO:0006006(InterPro)|GO:0009051(PANTHER)|GO:0009570(PANTHER)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | PRINTS | Glucose-6-phosphate dehydrogenase signature | 279 | 296 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | PRINTS | Glucose-6-phosphate dehydrogenase signature | 384 | 410 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | PRINTS | Glucose-6-phosphate dehydrogenase signature | 297 | 313 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | PRINTS | Glucose-6-phosphate dehydrogenase signature | 227 | 255 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | ProSitePatterns | Glucose-6-phosphate dehydrogenase active site. | 237 | 243 | IPR019796 | GO:0004345(InterPro)|GO:0006006(InterPro) | |
| Cind3g03542 | 551 | Hamap | Glucose-6-phosphate 1-dehydrogenase [zwf]. | 87 | 546 | IPR001282 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | Gene3D | - | 84 | 238 | - | - | |
| Cind3g03542 | 551 | Pfam | Glucose-6-phosphate dehydrogenase, C-terminal domain | 250 | 544 | IPR022675 | GO:0004345(InterPro)|GO:0006006(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | Coils | Coil | 318 | 338 | - | - | |
| Cind3g03542 | 551 | Pfam | Glucose-6-phosphate dehydrogenase, NAD binding domain | 92 | 216 | IPR022674 | GO:0006006(InterPro)|GO:0016614(InterPro)|GO:0050661(InterPro) | |
| Cind3g03542 | 551 | Gene3D | Dihydrodipicolinate Reductase; domain 2 | 239 | 545 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g03542 | K00036 | glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr1:470594603 | Cind3g03542 | Cind-Chr3:343807254 | dispersed | |
| Cind | Cind-Chr3:343807254 | Cind9g04260 | Cind-Chr9:148147595 | dispersed | |
| Cind | Cind-Chr3:343807254 | Cind4g01643 | Cind-Chr4:168623181 | transposed |