Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g03790 | ATGATTGAACCACTCATTGGTAGGAGTGTTCAAAATCAGTTGCATATGGATACTTGTAAATATTCAGGCATCATTGAGGACTGCTGTTGTGACTACGAGAGCGTTAACAATGTTAATGGAGCAATTTTACATCCCTTGTTGCAACAGCTTGTTACAACTCCCTTCTTCCGATATTTTAAGGTGAAGTTATGGTGCGATTGCCCCTTCTGGCCTGATGATGGAATGTGCCGCCTGCGTGATTGCAGTGTATGCGAGTGTCCAGAACATGAATTCCCAGAATCTTTTAAGAAACCATCACCGTATATTCTTCCAAAAGATGATCCTGTATGTCAAGAAGGAAAGCCTGAGGCTACAGTTGACCGTACTCTGGATGCTAAGTCTTTTAATGGCTGGGTTGAAATAGATAATCGATGGACTCATGATGATGAAACTGATAATGGTGAAATGACGTATGTGAACCTGCAATTGAACCCTGAACGTCATACGGGTTACACAGGGCCATCAGCAAGAAGAATATGGGATGCTATATACTCAGAATATTGTCCAAGATATGCATATGGAGAGACGTGCCCTGAAAAGAAAGTACTATACAAGCTAATATCTGGTTTGCACTCCTCAATTTCTATCCATATAGGTGCAGATTATCTACTTGACGAGAGTAGCTATAAGTGGGGTCCAAATCCTGAATTGATGTATAATCGTGTCTTGAAACATCCTGATCGCGTGGAAAACTTGTACTTCACTTTCCTGTTTGTGCTTAGAGCTGTGACAAAAGCGGCTGCTTACCTGGATCAGGCCGAGTATGATTCTGGTAACCATGTGGAGGATCGTAGAGTCCAATCCTTAATTCGACAAATGGTTCACAATTCTGAACTGCAAGCTGCATGTGCTCTTCCATTTGATGAGGCTGAGCTGTGGCAAGGCCAAGGTGGACCCATACTCAGGCAACAGATCCAAAATCAGTTTCGAAACATCAGTGCACTCATGGACTGCGTAGGGTGTGAGAAGTGTCGTCTTTGGGGAAAACTTCAAGTTCTTGGTCTTGGAACTTCATTGAAGATTCTGTTCTCTGTCAATGATCAGAGTAACCCGGACCCACATCTGCAGTTACAAAGAAATGAAGTGATTGCTTTAATTAATCTACTAAATCGGCTATCAGAATCCCTTATATATGTTACTACAATAAAACTACCCGCTACAGATGTGGAAGAACCTGACCTAACTGAAGTTGAAGATGAGAACAATCAAGTGAAGAAAAGAACTTTGTTGTTCATGGTTCATATGTTTCTGCGAGGGTAG | 1299 | 41.88 | MIEPLIGRSVQNQLHMDTCKYSGIIEDCCCDYESVNNVNGAILHPLLQQLVTTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCECPEHEFPESFKKPSPYILPKDDPVCQEGKPEATVDRTLDAKSFNGWVEIDNRWTHDDETDNGEMTYVNLQLNPERHTGYTGPSARRIWDAIYSEYCPRYAYGETCPEKKVLYKLISGLHSSISIHIGADYLLDESSYKWGPNPELMYNRVLKHPDRVENLYFTFLFVLRAVTKAAAYLDQAEYDSGNHVEDRRVQSLIRQMVHNSELQAACALPFDEAELWQGQGGPILRQQIQNQFRNISALMDCVGCEKCRLWGKLQVLGLGTSLKILFSVNDQSNPDPHLQLQRNEVIALINLLNRLSESLIYVTTIKLPATDVEEPDLTEVEDENNQVKKRTLLFMVHMFLRG | 432 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g03790 | 432 | PIRSF | ERO | 6 | 429 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Cind3g03790 | 432 | SUPERFAMILY | ERO1-like | 30 | 396 | IPR037192 | - | |
| Cind3g03790 | 432 | Pfam | Endoplasmic Reticulum Oxidoreductin 1 (ERO1) | 43 | 390 | IPR007266 | GO:0005783(InterPro)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(InterPro)|GO:0071949(InterPro) | |
| Cind3g03790 | 432 | PANTHER | ERO1-RELATED | 11 | 399 | IPR007266 | GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0015035(PANTHER)|GO:0015035(InterPro)|GO:0016972(InterPro)|GO:0034975(PANTHER)|GO:0034975(InterPro)|GO:0071949(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g03790 | K10950 | ERO1-like protein alpha [EC:1.8.4.-] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr3:338155215 | Cind8g03380 | Cind-Chr8:22502418 | dispersed | |
| Cind | Cind-Chr1:357855274 | Cind3g03790 | Cind-Chr3:338155215 | wgd |