Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g04050	ATGGCAAATAGGAACTTGGAGAAATTGGCATCAATAGATGCGCAATTGAGGCTGTTGGTACCTGGTAAAGTATCTGAAGATGATAAGCTCATTGAATATGATGCTTTGCTTTTAGATAAGTTTCTTGATATTCTTCAAGATTTGCATGGTGAAGATCTCAAAGAAACTGTTCAAGAATGCTATGAGCTATCCGCGGAGTATGAAGGCAAGCGTGACCCTAAGAAGCTTGAGGAGCTTGGAAGTGTTTTGACAAGTTTAGATCCCGGGGATTCGATCGTCATTGCGAAAGCTTTCTCTCACATGCTTAACTTGGCGAATCTGGCAGAAGAGGTTCAGATTGCGTATCGTCGCAGGATCAAGTTGAAGAAGGGTGACTTTGCTGATGAAGCTAATGCAACGACTGAATCTGATATCGAGGAGACTTTGAAGAAGCTCGTGCATCAGCTTGGGAAGTCCCCTGAAGAGGTGTTTGATGCACTCAAGAATCAGACTGTTGATTTGGTCTTGACTGCTCATCCAACTCAGTCTGTTCGTAGATCTTTGCTTCAGAAGCATGGAAGGATCCGAAACTGTTTGGCTCAGTTATATGCCAAAGACATCACTCCTGATGATAAGCAGGAACTTGATGAGGCTTTGCATAGAGAAATTCAAGCTGCTTTCCGTACAGATGAGATCAGGAGGACTCCTCCAACTCCACAAGATGAGATGAGAGCGGGAATGAGCTACTTCCATGAAACAATCTGGAAGGGTGTTCCTAAATTCTTACGTCGTGTTGACACGGCTCTTAAGAACATTGGGATCAATGAACGTGTTCCCTACAATGCCCCTCTTATTCAGTTCTCTTCATGGATGGGTGGTGACCGTGATGGTAATCCAAGGGTGACACCTGATGTAACAAGGGATGTTTGCTTACTTGCCAGAATGATGGCAGCCAACATGTACTTTTCCCAGATAGAGGATCTAATGTTTGAGATGTCCATGTGGCGTTGTACTGATGAACTTCGTGTTCGAGCAGAAGAACTTTATAGATCAGCAAGGAGTGATGTGAAGCACTACATAGAGTTCTGGAAGCAGGTTCCTCCAACTGAACCTTATCGCGTAATTCTTGGAGATGTAAGGGATAAGTTATATAATACACGTGAACGAGCTCGACATCTGTTAGCCCATGAGAAATCCGACATTCCAGAAGAGTTTGTTTATACAAATGTCGAACAGTTCTTGGAGCCTCTCGAGCTATGCTACAGATCCCTGTGTGCTTGTGGTGATCGTGTGATTGCTGATGGAAGCCTTCTTGATTTTCTAAGACAAGTGTCCACATTTGGACTCTCGCTAGTAAAACTCGATATTAGGCAAGAATCTGATCGTCACACTGATGTCCTCGATGCCATCACTCAACATTTAGAAGTTGGTTCCTACCGTGAGTGGTCAGAAGAGAAACGTCAAGAGTGGCTTCTGTCTGAACTCAGTGGTAAACGTCCACTTTTTGGTGATGATCTTCCCAAAACTGAGGAAATTAAGGATGTTTTGGATACATTTGCTGTATTAGCAGAACTCCCATCTGATTGTTTTGGTGCTTACATCATTTCAATGGCTACATCACCTTCTGATGTGCTTGCTGTTGAGCTTCTTCAACGTGAATGCCATGTGAAGCAACCGTTACGTGTGGTCCCACTTTTTGAAAAACTTGCTGATCTTGAAGCGGCCCCCGCTGCCATGGCCCGTCTTTTCTCAGTTGACTGGTACACTAAACGGATCAACGGGAAGCAAGAAGTCATGATTGGATACTCTGATTCAGGAAAAGATGCTGGAAGGTTTACTGCTGCATGGCAGCTATACAAAGCGCAAGAAGAGCTTATAAAAGTTGCAAAGGATTTTGGAGTTAAACTCGTCATGTTCCACGGACGTGGTGGGACCGTCGGTAGAGGAGGTGGCCCCACCCATCTTGCTATCCTGTCTCAGCCACCAGAGACCATTCATGGATCTCTTAGAGTCACAGTTCAAGGAGAGGTTATTGAACAATCTTTTGGTGAGGAACATTTGTGTTTCAGAACACTTCAAAGGTTTTGTGCAGCTACACTTGAGCATGGAATGAACCCCCCAATCTCACCACGACCCGAATGGCGTCAACTTATGGACGAGATAGCAGTTCTTGCAACTGAACAGTACCGTTCAATTGTATTCCAGGAGCCACGTTTTGTCGAGTATTTCCGCCTTGCAACACCAGAATTGGAGTACGGACGTATGAATATCGGAAGTCGCCCAGCAAAAAGAAAACCAAGTGGAGGCATTGAATCACTCCGAGCTATTCCATGGATCTTCGCATGGACTCAGACCAGGTTCCATCTCCCGGTTTGGCTCGGGTTTGGGGCAGGATTCAAGCATGTCATTCAAAAGGACAGCAAGAATCTTCAAATGCTACAAGAAATGTACAAAACCTGGCCTTTCTTTAGGGTGACCATTGATTTAGTTGAAATGGTGTTTGCTAAAGGAGACCCGGGTATTGCTGCACTGAACGACAAGCTCCTTGTCTCTGAAGATCTCTGGTCCTTTGGAGAATCTTTGAGGACAAACTATGAAGAAACCAAGGATTATCTCCTCATGATTGCTGGACACAAGGACCTTCTTGAGGGTGATCCCTACTTGAAACAGAGACTTCGTCTGCGTGATTCATACATCACAACATTGAATGTGTGCCAAACTTACACCCTCAAGCGAATCCGTGATCCAAACTATCATGTGACATTAAGGCCTCACATCTCTAAAGAGTATGCTGAGCCAAGCAAACCTGCAGATGAACTCATCCACTTGAACCCAACTAGTGAGTATGCACCAGGTTTGGAGGACACTCTTATCCTGACCATGAAGGGAATTGCTGCTGGTATGCAGAACACCGGTTAA	2898	44.76	MANRNLEKLASIDAQLRLLVPGKVSEDDKLIEYDALLLDKFLDILQDLHGEDLKETVQECYELSAEYEGKRDPKKLEELGSVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRIKLKKGDFADEANATTESDIEETLKKLVHQLGKSPEEVFDALKNQTVDLVLTAHPTQSVRRSLLQKHGRIRNCLAQLYAKDITPDDKQELDEALHREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPDVTRDVCLLARMMAANMYFSQIEDLMFEMSMWRCTDELRVRAEELYRSARSDVKHYIEFWKQVPPTEPYRVILGDVRDKLYNTRERARHLLAHEKSDIPEEFVYTNVEQFLEPLELCYRSLCACGDRVIADGSLLDFLRQVSTFGLSLVKLDIRQESDRHTDVLDAITQHLEVGSYREWSEEKRQEWLLSELSGKRPLFGDDLPKTEEIKDVLDTFAVLAELPSDCFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLEAAPAAMARLFSVDWYTKRINGKQEVMIGYSDSGKDAGRFTAAWQLYKAQEELIKVAKDFGVKLVMFHGRGGTVGRGGGPTHLAILSQPPETIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFCAATLEHGMNPPISPRPEWRQLMDEIAVLATEQYRSIVFQEPRFVEYFRLATPELEYGRMNIGSRPAKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAGFKHVIQKDSKNLQMLQEMYKTWPFFRVTIDLVEMVFAKGDPGIAALNDKLLVSEDLWSFGESLRTNYEETKDYLLMIAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQTYTLKRIRDPNYHVTLRPHISKEYAEPSKPADELIHLNPTSEYAPGLEDTLILTMKGIAAGMQNTG	965

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g04050	965	FunFam	Phosphoenolpyruvate carboxylase 1	308	443	-	-
	Cind3g04050	965	Hamap	Phosphoenolpyruvate carboxylase [ppc].	23	965	IPR022805	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	ProSitePatterns	Phosphoenolpyruvate carboxylase active site 2.	591	603	IPR033129	-
	Cind3g04050	965	ProSitePatterns	Phosphoenolpyruvate carboxylase active site 1.	168	179	IPR018129	-
	Cind3g04050	965	Pfam	Phosphoenolpyruvate carboxylase	34	965	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	Gene3D	Phosphoenolpyruvate-pyruvate domain	308	443	-	-
	Cind3g04050	965	SUPERFAMILY	Phosphoenolpyruvate-pyruvate domain	33	965	IPR015813	GO:0003824(InterPro)
	Cind3g04050	965	PRINTS	Phosphoenolpyruvate carboxylase signature	440	460	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	PRINTS	Phosphoenolpyruvate carboxylase signature	167	180	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	PRINTS	Phosphoenolpyruvate carboxylase signature	280	295	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	PRINTS	Phosphoenolpyruvate carboxylase signature	631	660	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	PRINTS	Phosphoenolpyruvate carboxylase signature	220	236	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	PRINTS	Phosphoenolpyruvate carboxylase signature	763	789	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	PRINTS	Phosphoenolpyruvate carboxylase signature	589	609	IPR021135	GO:0006099(InterPro)\|GO:0008964(InterPro)\|GO:0015977(InterPro)
	Cind3g04050	965	PANTHER	PHOSPHOENOLPYRUVATE CARBOXYLASE	27	965	IPR021135	GO:0005829(PANTHER)\|GO:0006099(InterPro)\|GO:0008964(PANTHER)\|GO:0008964(InterPro)\|GO:0009507(PANTHER)\|GO:0015977(InterPro)\|GO:0048046(PANTHER)\|GO:0048366(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g04050	K01595	phosphoenolpyruvate carboxylase [EC:4.1.1.31]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	67423	Cind1g05472	Cind3g04050
	68004	Cind3g04050	Cind8g00191

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr1:341313585	Cind3g04050	Cind-Chr3:327102502	dispersed
	Cind	Cind-Chr1:364127104	Cind3g04050	Cind-Chr3:327102502	dispersed
	Cind	Cind-Chr2:161769577	Cind3g04050	Cind-Chr3:327102502	dispersed
	Cind	Cind-Chr3:284180087	Cind3g04050	Cind-Chr3:327102502	dispersed
	Cind	Cind-Chr3:219201942	Cind3g04050	Cind-Chr3:327102502	dispersed
	Cind	Cind-Chr3:327102502	Cind8g02086	Cind-Chr8:89923745	dispersed
	Cind	Cind-Chr2:72732894	Cind3g04050	Cind-Chr3:327102502	transposed
	Cind	Cind-Chr3:234184726	Cind3g04050	Cind-Chr3:327102502	transposed
	Cind	Cind-Chr4:74602583	Cind3g04050	Cind-Chr3:327102502	transposed
	Cind	Cind-Chr8:254045461	Cind3g04050	Cind-Chr3:327102502	transposed
	Cind	Cind-Chr5:202833984	Cind3g04050	Cind-Chr3:327102502	transposed
	Cind	Cind-Chr5:180716811	Cind3g04050	Cind-Chr3:327102502	transposed
	Cind	Cind-Chr1:364097384	Cind3g04050	Cind-Chr3:327102502	wgd
	Cind	Cind-Chr3:327102502	Cind8g00190	Cind-Chr8:254042037	wgd