Gene detail

Gene Search

Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g04055	TGTAGAACTCAAAACCCTGAAATGGGTGATGAAAAAGAAGTGAAACAAGTTGTAAAAAATGATGAGAAAACTGAAAAGGGTTTAAAGAGTGATCGCAGGGATCAGAAAACATTAGAGAAGCTTAGGGCTGAAAGGCAAGCAAAAATTGATGAACTTAAGGAAAGGACTAATTACTACATCACTCAGCAACTCATTCAGAAATACGACCCTGACCCAGCAGCAAAAGCAGCTGCTGCATCTGTCCTTGCATCCAAATTGGGCGCTGATTCAGGCCTAAAAGTGTTTCTTGGGGACGAATCACAACAGAACCCATACGCCACAGGGAAGAGCAGTGATGCTGAGCTTCAACAATCCACTGGTCTTCGTAAACGAAATCAATCGAATACTAGATCTTCTGGAAGCAATGCAGGTCAACAATCCGCTAAAGAAGTGGCTCAATATGAAGAAAATGAGATTTCTGAGAATTCACCGCACGGGCAGCTTGTTGTTAATCATCATAATGCTACATCTTTAGGTGCTCAAGATGGTGGTTGGATTGCTCGAATTGCTGCATTGCTTGTGGGAGAGGACCCCACACAATCGTACGCCCTCATATGTGGCAATTGCCATATGCATAATGGTCTTGCAAGAAAAGAGGAATTCCCCTTCATCACTTATTATTGTCCCCATTGCAATGCTCTGAATAAACCAAAGGACTCGGTACTACCTTCAAATATAATGTCTCGTGTTTCGGGATCTTCACCTGTAGCAAGCGCAGGTGTTAATTTGATTGAACAACATAAGGAGTCAAAAGTTGAGAAAGAATCTGCTGCTAGCAGTCCCGTGGCCGATGTGGTGGAAGAGAAAGATGCAACTGAAACTAAACTGACTGAGGATCCTTCTAGTCATTAG	891	42.76	CRTQNPEMGDEKEVKQVVKNDEKTEKGLKSDRRDQKTLEKLRAERQAKIDELKERTNYYITQQLIQKYDPDPAAKAAAASVLASKLGADSGLKVFLGDESQQNPYATGKSSDAELQQSTGLRKRNQSNTRSSGSNAGQQSAKEVAQYEENEISENSPHGQLVVNHHNATSLGAQDGGWIARIAALLVGEDPTQSYALICGNCHMHNGLARKEEFPFITYYCPHCNALNKPKDSVLPSNIMSRVSGSSPVASAGVNLIEQHKESKVEKESAASSPVADVVEEKDATETKLTEDPSSH	296

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g04055	296	MobiDBLite	consensus disorder prediction	1	37	-	-
	Cind3g04055	296	MobiDBLite	consensus disorder prediction	101	155	-	-
	Cind3g04055	296	MobiDBLite	consensus disorder prediction	279	296	-	-
	Cind3g04055	296	MobiDBLite	consensus disorder prediction	260	296	-	-
	Cind3g04055	296	Coils	Coil	35	55	-	-
	Cind3g04055	296	PANTHER	ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK	31	268	IPR040115	GO:0071782(PANTHER)\|GO:0071786(PANTHER)\|GO:0071786(InterPro)
	Cind3g04055	296	Pfam	Predicted integral membrane zinc-ribbon metal-binding protein	178	228	IPR019273	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g04055	K23292	endoplasmic reticulum junction formation protein lunapark

Event-related genes

Select	Gene_1	Gene_2	Event_name
	67428	Cind1g05479	Cind3g04055
	68007	Cind3g04055	Cind8g00197

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:326593963	Cind8g01750	Cind-Chr8:35595644	dispersed
	Cind	Cind-Chr5:150912596	Cind3g04055	Cind-Chr3:326593963	transposed
	Cind	Cind-Chr1:364240881	Cind3g04055	Cind-Chr3:326593963	wgd
	Cind	Cind-Chr3:326593963	Cind8g00197	Cind-Chr8:254341478	wgd