AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g04068 ATGGCTCAAGAAGATCATACTCTTAGGTGTAATAATAGTAGTAGATTGTCGAAAAAATCCAAGAAGGTGCCACAGAGAGGAATGGGTGTGGCTCAGCTTGAGAAGTTAATATTAGAAGAACAACAAAAGAAAGATGTTGTTATGACACCTAATTTGACTAGTTTTAGGCCACCCATGATTCCTTTACCGCCGCCATTGCCACCTAATGATCGTCCTTTGATCACAAGATCTGAGGCTATGAATGGTGTTTTTCTGTCTAAGCCAACAAATAGTGGTAGCGGTGGTGGTAATAATACTAGTAGGTTATGGACATGTAGTGAGAATCCGAATCCAAACCAGAATCGGGCATTGGACCACCGTGGGTATGCGGTCACTATGCCGACAAATCTAGGTGGTTTGCCATATGAATCCAACGCGCTTGTTTGGCCGCCACCAGTCCCTAGATCACATTTTCAACAACCTAGTACATCATCTATGATGGAGCCCCCTTCAAACCAAAGCTATTGTAGCAACAAGTATTCGCCATTGTGGCCAGACGAAGAGAAGATTGTTGGCAAGAAGAGATCATACCCTTTTTTGGTTGATAATATGCCGATACCCTCTTTCAATTGCAAATTTCCTTCTGCTTATGTCTCCCCAATCACAAGATTTGATGAATCAACTTCTTGTAGCAATGGATGCACTACTAGTTTAGAGCGCATGGTTCCTATTTTCAGAGAAAACCCCCCTCGAAGCCAAGGCAACATTACAGATCAAAAAACCAAGAAACTTATTGAGAATAATCGCGATCTCACCAAAGATTTTCTCACATTGGCCCCTCCTCGAGCTTCACCACAGTCACACTCAAGCTCAAATGAAAAGCTGCAGTCTTTATCTGGTCAAACAAAAGATCCATCTGGAGTAGAATGGTCAAATCATCAGCAACTGCATAGTTTCTTTCCAGCAGCGAAGACTAATGGAAACAACAATGATGAAGCAGTGGAACATGTTGATCTCAGTTTGAAGTTATAG 1011 42.04 MAQEDHTLRCNNSSRLSKKSKKVPQRGMGVAQLEKLILEEQQKKDVVMTPNLTSFRPPMIPLPPPLPPNDRPLITRSEAMNGVFLSKPTNSGSGGGNNTSRLWTCSENPNPNQNRALDHRGYAVTMPTNLGGLPYESNALVWPPPVPRSHFQQPSTSSMMEPPSNQSYCSNKYSPLWPDEEKIVGKKRSYPFLVDNMPIPSFNCKFPSAYVSPITRFDESTSCSNGCTTSLERMVPIFRENPPRSQGNITDQKTKKLIENNRDLTKDFLTLAPPRASPQSHSSSNEKLQSLSGQTKDPSGVEWSNHQQLHSFFPAAKTNGNNNDEAVEHVDLSLKL 336
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g04068 336 MobiDBLite consensus disorder prediction 272 304 - -
Cind3g04068 336 MobiDBLite consensus disorder prediction 275 304 - -
Cind3g04068 336 PANTHER OS01G0212500 PROTEIN 10 336 IPR040356 GO:0003700(InterPro)
Cind3g04068 336 MobiDBLite consensus disorder prediction 86 106 - -
Cind3g04068 336 MobiDBLite consensus disorder prediction 1 27 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g04068 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
68012 Cind3g04068 Cind8g00213
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:325783955 Cind8g00213 Cind-Chr8:255048949 wgd