AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g04226 ATGGGAGCTCATTATAGCAAGAAATCTAATGCTGCTGGTGCTTCGGGTTCGGGTTTGGGTTCGGGTCATATAAGTCATCAGATAGTTTCAGAGCTGAATGCTTATGAAGCTGCTTGTAGATCAGATACTGATTTGCAGTCATTTGATGCTATGTTACAAGCTCGGGCGAATAATGTGATTAGTACTTTAGCTACGGGGGTCGAAGTTCGGGCTATGTCGTTTGATACGTTAAAGGAAGTGACGGAATGTTTGTTGGAAATGAATCAAGAAGTTGTGAAGGTGATTTTGAATTGTAAGAAAGATATATGGAAGAATCAGGAGTTGTTTGAATTGGTGGAGGAGTATTTTGAGAATAGTTTGCAGACGCTCGATTTCTGTGCTGCGTTGGATAAGTGTTTGAAACGCGTGAGGGATAGTCAGTTGTTGATACTTGTGGCTTTGCAGCATTTTGATGAGGATGTTGAAGGTGTTGATGATAATCGGTATGAGAAGACGCTTGAGGATTTGAAAGGGTTTAAGGAGGCTGGTGATCCGTTTACGGATGAGTTTTTTAAGATATTTCATTCGGTTTATAAGCAACAAATGGTGATGCTTGATAAGTTACAAGCGAAGAAAATGAAGTTGGATAAGAAAGTGAAGTATATGCAAACATGGAGGAAGGTTTCGACTGTGATATTTGTGGCTACTTTTGCGGCGGTGTTGATATGTTCTGTGGTTGCGGCTGCTATGGCTGCACCGCCAGTGGCTGCTGCTCTTGCTGCTGCAAGTGCTATTCCGCTTGGTTCAATGGGGAAGTGGATCAACTCCCTTTTGAAAAACTATGAAAATGCAATTAAAGGGCAGAAGGAGATCATTAGCTCGATGCAAGTGGGTGGATTTGTGGCGATTAGGGACCTTGATACGATAAGGGTTCTTGTTGATAGACTTCAGTTGGATATAGAGGAGATGATGATGAAGGCTGATCATGTGATTGAAGGTGATGGCGAGGGTGATGAAATGGTGAAAATTGCAATCGAGGAGATAAAGGTTAAGCTTAATTCGTTTATGAAGAATGTGGATGATTTAGGGATGCAGGCTGATAATTGTAGCCGTGATGTTAGACGAGCTAGGACTGTTGTCCTGCAAAGAATTATTAAGCCGCCACATACTTAA 1152 41.84 MGAHYSKKSNAAGASGSGLGSGHISHQIVSELNAYEAACRSDTDLQSFDAMLQARANNVISTLATGVEVRAMSFDTLKEVTECLLEMNQEVVKVILNCKKDIWKNQELFELVEEYFENSLQTLDFCAALDKCLKRVRDSQLLILVALQHFDEDVEGVDDNRYEKTLEDLKGFKEAGDPFTDEFFKIFHSVYKQQMVMLDKLQAKKMKLDKKVKYMQTWRKVSTVIFVATFAAVLICSVVAAAMAAPPVAAALAAASAIPLGSMGKWINSLLKNYENAIKGQKEIISSMQVGGFVAIRDLDTIRVLVDRLQLDIEEMMMKADHVIEGDGEGDEMVKIAIEEIKVKLNSFMKNVDDLGMQADNCSRDVRRARTVVLQRIIKPPHT 383
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g04226 383 PANTHER UPF0496 PROTEIN 3-RELATED 15 379 IPR007749 -
Cind3g04226 383 Pfam Protein of unknown function (DUF677) 45 377 IPR007749 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g04226 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:364251864 Cind4g05703 Cind-Chr4:202670016 wgd