Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g04231 | ATGGAGCTCAGGTGTATACAATCACCAGTTGTTAGTAGCATACCTACTAACAACAGCAAGCATCAACTAGTACAATGCTACGGTCAGTTTATTCGATCTTTTGGAACGAAAAAAGGTGTTTTTGAAACGAATGGGGCGAAGGTTAAATATGCTCGGTTTAGTGTTCGAGCATCAGCAGCAGTTGGTTCAGTGCCTGCTGAAACAAGAACACAAGATGGCGAAAAAGACGGAGATCCAGTATTTGTTGCAGGAGCAACTGGAAAAGTTGGTTCCCGAACAGTAAGGGAGCTTTTGAAATTAGGATTTAATGTCCGAGCTGGTGTAAGGAGTACTCAAAGAGCAGAATCTCTGGTGAAAAGTGTGCAGCAGATAAAGCTTGATGACGGAAGTCAGCCTATAGAGAAGCTTCAGCTAGTGGAGTGTGACTTGGAGAAACCGGAGCAGATTAAGGCGGCATTGGGCAGTGCTTCAACAGTTATATGCTGCATTGGAGCGAGTGAGAAGGAGATATTTGATGTCACTGGACCATACCGAATTGACTTTCTAGCCACAAAAAACCTCATTGATGCAGCTGCTGCTGCAAAAGCGAAACACTTTATTCTGGTTACTTCTTTGGGAACAAACAAGTTTGGATTTCCTGCTGCTGTATTGAATTTGTTCTGGGGAGTCCTATGCTGGAAAAGGAAGGCTGAAGAAGCACTTCTGGCTAGTGGAATTCCTTACACTATAGTGAGACCTGGAGGTATGGAGCGTCCTACAGACTCTTTCAAGGAAACACATAATCTTACTCTCGCTACAGAAGATACTTTATTTGGTGGTCTTGTATCAAATTTACAGGTGGCAGAACTCCTTGCATTTATGGCTAAAAACCCAACTCTCTCATATTGTAAAGTACTGGAAGTAGTTGCCGAAACAACAGCACCATTGACCCCCTTTGGGGACCTTTTAACAAAAATACCATCTAAACGTGCTGTACCTTTACAGCCCAAGGAACCTGAAGCTACCAAAGAACCTGCACCTGCACCTGTTCCTGAAACTGAAATCATTGCCACTGAAACGCCATCCGAGTCTAAACCAGTTGCCACGCGACCACTGTCCCCGTACACAGCTTATGAAAACTTGAAGCCACCAACATCTCCAATCCCGACACCAAGTGGATACCAAAAGAAACCAGAAGTTGCACCAGAAGCTGTACCAAAAGTTGCAACATCAGAAGTTGCACCAGAAGCTGTACCAGCAGCTACGACAGCCGTTGACACTGTTACAAAGATTGAAGACGTAAGTGATGTCAAAGAGGATCCTACTCAAGTTGTGACATCCAACAGCAGGTCCCCTTACTATGTATATGAGACTCTGAAGCCTCCTATGTCGCCAACTCCAAGTCCTCCATCGGTATCACCACCACCAATCGTCCCTGTCGACAACGGGTCCCCCATTGCTTCCACACCAGAAAGCACCTCAGCTCAATCTACAGTGAAGCCAAGACCACTTTCACCTTACTCCATGTACGAAAGTTTGAAGCCTCCAAGTTCTCCTACTCCTTCCAAACCCCATTAA | 1557 | 45.15 | MELRCIQSPVVSSIPTNNSKHQLVQCYGQFIRSFGTKKGVFETNGAKVKYARFSVRASAAVGSVPAETRTQDGEKDGDPVFVAGATGKVGSRTVRELLKLGFNVRAGVRSTQRAESLVKSVQQIKLDDGSQPIEKLQLVECDLEKPEQIKAALGSASTVICCIGASEKEIFDVTGPYRIDFLATKNLIDAAAAAKAKHFILVTSLGTNKFGFPAAVLNLFWGVLCWKRKAEEALLASGIPYTIVRPGGMERPTDSFKETHNLTLATEDTLFGGLVSNLQVAELLAFMAKNPTLSYCKVLEVVAETTAPLTPFGDLLTKIPSKRAVPLQPKEPEATKEPAPAPVPETEIIATETPSESKPVATRPLSPYTAYENLKPPTSPIPTPSGYQKKPEVAPEAVPKVATSEVAPEAVPAATTAVDTVTKIEDVSDVKEDPTQVVTSNSRSPYYVYETLKPPMSPTPSPPSVSPPPIVPVDNGSPIASTPESTSAQSTVKPRPLSPYSMYESLKPPSSPTPSKPH | 518 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g04231 | 518 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 79 | 318 | IPR036291 | - | |
| Cind3g04231 | 518 | MobiDBLite | consensus disorder prediction | 370 | 410 | - | - | |
| Cind3g04231 | 518 | Gene3D | - | 78 | 322 | - | - | |
| Cind3g04231 | 518 | PANTHER | PROTEIN TIC 62, CHLOROPLASTIC | 1 | 466 | IPR044719 | - | |
| Cind3g04231 | 518 | Pfam | NAD(P)H-binding | 84 | 291 | IPR016040 | - | |
| Cind3g04231 | 518 | MobiDBLite | consensus disorder prediction | 455 | 474 | - | - | |
| Cind3g04231 | 518 | MobiDBLite | consensus disorder prediction | 433 | 447 | - | - | |
| Cind3g04231 | 518 | CDD | SDR-a5 | 79 | 305 | - | - | |
| Cind3g04231 | 518 | MobiDBLite | consensus disorder prediction | 478 | 496 | - | - | |
| Cind3g04231 | 518 | MobiDBLite | consensus disorder prediction | 427 | 518 | - | - | |
| Cind3g04231 | 518 | FunFam | Protein TIC 62, chloroplastic | 76 | 322 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g04231 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr1:268662580 | Cind3g04231 | Cind-Chr3:364306349 | dispersed | |
| Cind | Cind-Chr3:364306349 | Cind5g04338 | Cind-Chr5:106480844 | dispersed | |
| Cind | Cind-Chr4:175365293 | Cind3g04231 | Cind-Chr3:364306349 | dispersed |