AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g04242 ATGATGAAAGGAGTAAGTGACTACCTAAAGATGTCGACTGATCCGACAGCCTCAGCTGCAGCAACATCACTAATCAACTCTGATTTTCAACAAATCGGTCTTGCTGCTAGTAACCTTGCTGATCACGTTATCAAGCTTGGTGTTAGTGGTGGTTTGATTACCACCTGCCTTCAATGGTTAGCTTGTATCGCAGCTGTTTATTTGTTGGTATTGGATCGAACAAACTGGAGGACTAACATGCTTACATCACTCTTGGTTCCTTATGTTTTCTTGACATTTCCTAATTGGTTGTTTGGGATTTTGAGGAGTGATATTGGAAGGTGGATTCTTTTGGTTGGAGTAATAGTGAGGTTGTTCTTTCCTCATCATTTTCAAGACTATTTGTTTTTGCCCGGATCAATCCTTATGCTGGTTGTGATAGCTCCAAGTCTTGTTGCTGGCTACGTAAGAGAAGGGTGGATTGGTGTGATTATCTGCTTAGTTATCGGATGCTATCTGCTTCAAGAACATATCAGAGCTTCTGGCGGGTTCAAAAATGCATTCACCAAGAGCAACGGCATTTCCAACACAATTGGTATCGTTCTCTTGTTTGTCTTCCCCGTGTGGGCTTTGATCGCCTTGATATTTTGA 630 41.9 MMKGVSDYLKMSTDPTASAAATSLINSDFQQIGLAASNLADHVIKLGVSGGLITTCLQWLACIAAVYLLVLDRTNWRTNMLTSLLVPYVFLTFPNWLFGILRSDIGRWILLVGVIVRLFFPHHFQDYLFLPGSILMLVVIAPSLVAGYVREGWIGVIICLVIGCYLLQEHIRASGGFKNAFTKSNGISNTIGIVLLFVFPVWALIALIF 209
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g04242 209 Pfam Cold acclimation protein WCOR413 19 196 IPR008892 GO:0016020(InterPro)
Cind3g04242 209 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 8 204 IPR008892 GO:0016020(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g04242 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:364742676 Cind3g04242 Cind-Chr3:364745637 tandem