AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g04263 ATGTGCGACCGTGGTGGTAAACCTACCGGATCCGGATCAAGTACAAATACAAGTTCCAAAAAGACAGATTGTCCGTTTAAGTTGCGTGATTGGAACCGTTTTGAATCGGCGTGGAAGTTATTACAAGATTCTCCAACGTGGACATCGTACACGGAAAACTATGAGAAACTTCGAACATCGTTGTCGGAATACCCACATAAAACCAAAATGATGATGATAAGATCAGTAGCGTTAGTTAAGCCGTTAACGACGATCACATGTTCGTCGCGTAACGAGACGTATATACCGAAGCTCCAACCGTTTAGCCGAACTAAGATTGATCGGATGGTCAAAGATCCACCTTTGATTCAAAAAGCTGAAAATGATTTAGCTGATTATTGTTCCACTTTGGAAGAAGCGCCAAAGGAGGAGGTAGAGAGGATGATAATAGAATCAGGAGGTGTGAAATCATTAATGGGATGTTTACACGGAATAACCGAAATTCACAAGGCGAAAAAGCAGTCAGAAAATGAGAACGGATCAGAAGCAAGTAATCTGAACTCGTCGGAGAATGTGACCACAGATGGAGGTAAAAGGACAGAATGCCGAGTGCCAGATGGATTACCGAAGAGCCGAGAAGAGATGGAGGAAGAAGAGAGTGGGAAAATGCCGGATTCACCATTTACTAGATTGCTTCGCGCAAAAGGGAAGTCCCCTGCTTGGTACTCCCCTGCTCCTGATCATTAA 726 43.8 MCDRGGKPTGSGSSTNTSSKKTDCPFKLRDWNRFESAWKLLQDSPTWTSYTENYEKLRTSLSEYPHKTKMMMIRSVALVKPLTTITCSSRNETYIPKLQPFSRTKIDRMVKDPPLIQKAENDLADYCSTLEEAPKEEVERMIIESGGVKSLMGCLHGITEIHKAKKQSENENGSEASNLNSSENVTTDGGKRTECRVPDGLPKSREEMEEEESGKMPDSPFTRLLRAKGKSPAWYSPAPDH 241
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g04263 241 MobiDBLite consensus disorder prediction 189 217 - -
Cind3g04263 241 MobiDBLite consensus disorder prediction 165 241 - -
Cind3g04263 241 MobiDBLite consensus disorder prediction 171 188 - -
Cind3g04263 241 MobiDBLite consensus disorder prediction 8 22 - -
Cind3g04263 241 MobiDBLite consensus disorder prediction 1 22 - -
Cind3g04263 241 PANTHER CCG-BINDING PROTEIN 1 75 131 IPR037502 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0010183(InterPro)|GO:0036033(InterPro)|GO:0036033(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g04263 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:365524558 Cind8g02474 Cind-Chr8:235191562 wgd