AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g04351 ATGGGTGGGAATCTTTATTGGGTAAAAAACGATTTTGATGATGAGACTAAATTTGAAGGGGTTGTTGTGGTTTTTGTATGGGCCAGTTTTGTTGATGTTAAGGATTATGTGGAGCTTTATTCTTCTTTTGGATGGAATTCACTTGTTGTTGTCTCTGATTTTCTTAATCCATTTTTCCCTGAGAGAGCCACATCACTTGCTTTTTCCGTCATCAATGAGCTTTTAGAGGAGTTGAGGGCTAGACCATGTCCGTTAGTCCTTGCATCCTTTTCTGGTGGTTCACAAGCTTGTATGTACAAGGTTTTTCAGATCATTGAAGGAACATGTGAAGCACATCTCAGTCTGGATGATAGTCGGTTAATCATGACATGTATATCTGGTCAAATGTACGATTCTGGTCCAGTTAATGTTACTGGTGATTTGGGTGCCCGGTTTGCTTTACATTCCTCCAACGTGCCTGGTTCGTCAAAGCTGGTATCAATGGTCGCAAAAGGCATCACGTCTGGTCTCGATGCTCTATTCCTTACTAGATTTGGATCCCAACGCTCCGAGTACTGGCAAACGCTCTACTCCTCAGTTGGTTTGGGAGCTCCGTTTCTAATATTATGTTCAGAAAGTGATGATCTTGCTCCATATCCAGCTGTTTACACATTTGCTCAACAAGTACAAGGACTAGGAGGACATGTTCGGCTTTTTGGATGGAAGGACTCTCCTCATGTCGGTCATTACAAGCACAATCCCACAGAGTACAGAGCAGCTGTAAGCGAATTCTTTGACCACTCTGTTTCAATATTCAACCAGAAACTACAACAACTTGCTGAGCGAACCGGCATGGAAGGTATGCACGATAAAATATGTGAATTAGTTTGCGACCTACAAAATGCTGCAGTTGACTCAAACCAGAGCCTTAGAAGAGTAGCAGTCGGACCAAATGACCACTTCTTCTTACCAAGCTCAGCTGAATATCAAAGCAGTAAAGAATCTGGATCGTTACAAGATGAGCAAAAAGAAAGAAAAGCTGTCCTTTTGGCAAGTCCACCGAGCCTAAATCCACACAGTGTTCTTGGTCAAGTCCTGTTTGATGTTTGTGTGCCTAAAAACATCGAAGGTTGGGATATCAAGTTTGATAATAGGAAGCCGTTTGGGTCTACTTCTAAGGGCTCATCGTTAAATCCCTTAAAACGCATGAGACGATCAAGATTATGA 1206 42.21 MGGNLYWVKNDFDDETKFEGVVVVFVWASFVDVKDYVELYSSFGWNSLVVVSDFLNPFFPERATSLAFSVINELLEELRARPCPLVLASFSGGSQACMYKVFQIIEGTCEAHLSLDDSRLIMTCISGQMYDSGPVNVTGDLGARFALHSSNVPGSSKLVSMVAKGITSGLDALFLTRFGSQRSEYWQTLYSSVGLGAPFLILCSESDDLAPYPAVYTFAQQVQGLGGHVRLFGWKDSPHVGHYKHNPTEYRAAVSEFFDHSVSIFNQKLQQLAERTGMEGMHDKICELVCDLQNAAVDSNQSLRRVAVGPNDHFFLPSSAEYQSSKESGSLQDEQKERKAVLLASPPSLNPHSVLGQVLFDVCVPKNIEGWDIKFDNRKPFGSTSKGSSLNPLKRMRRSRL 401
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g04351 401 SUPERFAMILY alpha-beta-Hydrolases 64 260 IPR029058 -
Cind3g04351 401 MobiDBLite consensus disorder prediction 319 338 - -
Cind3g04351 401 PANTHER UNCHARACTERIZED 5 266 IPR008547 -
Cind3g04351 401 Pfam Eukaryotic protein of unknown function (DUF829) 125 371 IPR008547 -
Cind3g04351 401 Gene3D alpha-beta hydrolase 148 268 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g04351 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr1:89437307 Cind3g04351 Cind-Chr3:370279894 dispersed
Cind Cind-Chr3:370279894 Cind8g00412 Cind-Chr8:51849627 dispersed