Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g05603	ATGTTTCGGCGATTCGAAGTTAGGAACATTGCTAGAGTATCAGGTGATGAAATTGACGCGGAGTTGCAAAAGTATTTCGGTACGAATGATGTCGAGAAGGCGTTAGATAGGAGGATTGATGGAAGAGCGGAGGGAGACGGTGAGAGGTTGAGTTCTGTTTTGTATAGGGAGAAGTTGGTGAGAAGTTTTGACTCGAGAGGTTATGAGAAGTTTAGGAATTTGGCCAAGTTGTCGAGGCCGAAGAGGAAAGGGAAGGGGAAAACGGAGGTGAAGGAAGTTGGGGAGAGTAAGAAAGGTGAGTGTTATTTAGTTGAGGTTGTTGAGGATTGCGAGAGGGAGGATGAGGATTTGAGTGCGTTGATTGGTGAGGAGGGGTATAGGGTCGGGAAGTGGAGAGGGTCGACAAGGTTGTTGCTTTTAGATGAGCGGTATGCGTGTAAAGCGGTTGATGAATTGCCTGAGGCGATTAAGGCATGCTTAGCAGGATCACTATTCGAACTTGTGAGATGCAAGCTCACTTTGTTTTACAACTACTGGCAGATGAACGAGGTCTTAGAGGCTTTGCTTCCAAAGGGTATGATTGTTCCTTCGTCCTTTGAGACTGTTGGACATATTATTCATTTAAACTTAAGGGATGAACATCTTCCATATAAGAATGTTATAGCAAAGGTTGTTTTGGACAAAAACAAACCAAAGATACAAACAGTCGTCAATAAGATTGATGCAATCAATAATGACTTTAGAACGATGCAGCTTGAAGTTTTGGCTGGAAATCATTCTCTTGTGACAAGAGTTGTAGAAAATGGACTTCATTTGCATGTTGATTTGGCATCAGTGTACTGGAGCTCAAAGCTGGCAACAGAGAGGCAGAGACTTCTAAATTGCTTTACACGGAGTGATGTTGTTTGTGACGTGTTTGCTGGGGTTGGGCCGTTAGCCATATCAGCGGCGAAAAAGGTTAAGCATGTGTATGCAAATGATTTAAATCCTCATGCAGTTGACTATATGGAAAGAAATTCTGTGCTCAACAAATTAGAAAGAAAGATTGAGGTTTTCAACATGGATGGGAGAAGGTTTATTGATGCTATCTTTAAGAGTAAAAGCTCTCGACCCATCACGCAAGTGGTAATGAATCTGCCCAAAGATGCAGCTGAATATCTTGATGCATTTAAAGGAATTTTTAGAGATGCTGACAGGAATGAAGAGTTAACTTTGCCAATGATCCATGTATATGGTTTCTCCAAAGCTGAAGATCCAGAGTTCGATTTTCACGAGCGGATAAGAATTGCATTGTCGGAGGTGGCATTTGAAGTTAAAATGCATAAAGTACGCCTTGTTGCCCCTGGGAAGTGGATGTTGTGTGCATCATTCGTGCTCCCAGAGAGAGTTGCGCTTGCTAGTCCCATCTCAGAACTGTAA	1419	42.57	MFRRFEVRNIARVSGDEIDAELQKYFGTNDVEKALDRRIDGRAEGDGERLSSVLYREKLVRSFDSRGYEKFRNLAKLSRPKRKGKGKTEVKEVGESKKGECYLVEVVEDCEREDEDLSALIGEEGYRVGKWRGSTRLLLLDERYACKAVDELPEAIKACLAGSLFELVRCKLTLFYNYWQMNEVLEALLPKGMIVPSSFETVGHIIHLNLRDEHLPYKNVIAKVVLDKNKPKIQTVVNKIDAINNDFRTMQLEVLAGNHSLVTRVVENGLHLHVDLASVYWSSKLATERQRLLNCFTRSDVVCDVFAGVGPLAISAAKKVKHVYANDLNPHAVDYMERNSVLNKLERKIEVFNMDGRRFIDAIFKSKSSRPITQVVMNLPKDAAEYLDAFKGIFRDADRNEELTLPMIHVYGFSKAEDPEFDFHERIRIALSEVAFEVKMHKVRLVAPGKWMLCASFVLPERVALASPISEL	472

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g05603	472	ProSiteProfiles	SAM-dependent methyltransferase TRM5-TYW2-type domain profile.	199	461	IPR030382	-
	Cind3g05603	472	FunFam	tRNA (guanine(37)-N1)-methyltransferase	181	259	-	-
	Cind3g05603	472	SUPERFAMILY	S-adenosyl-L-methionine-dependent methyltransferases	195	461	IPR029063	-
	Cind3g05603	472	Gene3D	Vaccinia Virus protein VP39	262	459	IPR029063	-
	Cind3g05603	472	PANTHER	TRNA METHYLTRANSFERASE	85	463	-	GO:0002939(PANTHER)\|GO:0005737(PANTHER)\|GO:0008175(PANTHER)\|GO:0009019(PANTHER)\|GO:0030488(PANTHER)
	Cind3g05603	472	FunFam	tRNA (guanine(37)-N1)-methyltransferase	262	459	-	-
	Cind3g05603	472	Pfam	Met-10+ like-protein	198	396	IPR030382	-
	Cind3g05603	472	Hamap	tRNA (guanine(37)-N1)-methyltransferase [TRMT5].	47	461	IPR025792	GO:0030488(InterPro)\|GO:0052906(InterPro)
	Cind3g05603	472	Gene3D	-	180	258	-	-
	Cind3g05603	472	CDD	AdoMet-MTases	302	366	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g05603	K15429	tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:320404452	Cind9g03520	Cind-Chr9:219541456	dispersed