Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g05625 | ATGGTGGCCATCTTATCCTTCACCACATCCCCAACAAACTTCGGAGTAATTAATAATAACAATTCAAACAGAACATTATCATCAGCAGTTTCATTAAAGTCAAGCTCACAAATCACCATACCTAATAACATTAACCTTCATCAACATTATCCTCCGCTGTTTGTTCCTGAGGTTGAGAGTGCAGTAGATACATTGTATCCGGAGTTCAGGGCAGTGGATAATCTTGTGGCACGTAATACGTCTAGAGTTCTCAAAGCTTTTCAAAACGCCAGAGTTGGATCACATCACTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCTGGAGGTCGAGAAGCCCTTGACCAAGCTTTTGCAGAAATTTTTGGTGCTGAGTCAGCAATTGTCCGTTCACAGTTCTTCTCAGGTACTCATGCTATTACGTGTGCACTTTTTGCTTTCTTGAGGCCAGGTGATGAGCTTTTGGCGGTTGCTGGTGCTCCATATGATACACTTGAGGAAGTTATAGGAATCAGGGATGGTAATGGATTAGGTTCCTTGAAAGATTTTGGAATCAAGTATCGGGAAGTTGCACTTGCAGATGATGGAGGACTTGATTGGGATGCCCTTGAGGTCGCTTTAAAACCTGAAACGAAATGTGCCCTTATACAGAGGTCGTGTGGGTATTCTTGGCGGAAAAGCTTAAGTGTGACTGAAATTTTTAGGGCAATAGACATCATTAAGAGGCAAAATCCAAATTGTTTGGTTATGGTGGATAACTGTTATGGTGAATTCACAGAAGCAATTGAACCTCCAATGGTGGGCGCAGATCTTATTGCAGGAAGTTTAATTAAAAATCCTGGTGGAACAATTGCACCATGTGGTGGATACGTTGCAGGAAAAGAAAAATGGGTAAATGCAGCAGCAGCTCGTCTGTCTGCACCAGGTCTCGGGGTTGACTGCGGGTCAACTCCTGGTGACATTATGCGAACATTCTTTCAAGGATTATATCTCTCGCCTCAAATGGTTGGGGAAGCAATAAAGGGAGGCTTGCTGATTGCTGAAGTTATGTCAACAAAAGGTTACAAGGTTCAGCCACTTCCTCGAGTACCCCGTCATGACATAGTGCAGGCTGTACAACTTGGAAGCCGTGAGAAGCTTCTTGCTTTTTGTGAGGCTGTACAAAGAAGCTCACCTGTAAGCTCCTATACCCAACCAATTGCAGGTTCATCAGCTGGATATGCTTCAGAGGTTATATTTGCTGATGGGACGTTTATAGATGGAAGCACAAGTGAGCTCTCGTGTGATGGACCGTTAAGGGAGCCATTTTGTGTCTTCTGTCAGGGTGGTACTCACTGGACTCAATGGGGACTAGTTCTTGGTGAAATCTTGAAATCATTGTAG | 1383 | 43.89 | MVAILSFTTSPTNFGVINNNNSNRTLSSAVSLKSSSQITIPNNINLHQHYPPLFVPEVESAVDTLYPEFRAVDNLVARNTSRVLKAFQNARVGSHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDGNGLGSLKDFGIKYREVALADDGGLDWDALEVALKPETKCALIQRSCGYSWRKSLSVTEIFRAIDIIKRQNPNCLVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEKWVNAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSTKGYKVQPLPRVPRHDIVQAVQLGSREKLLAFCEAVQRSSPVSSYTQPIAGSSAGYASEVIFADGTFIDGSTSELSCDGPLREPFCVFCQGGTHWTQWGLVLGEILKSL | 460 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g05625 | 460 | Gene3D | - | 106 | 314 | IPR015421 | - | |
| Cind3g05625 | 460 | Gene3D | - | 55 | 105 | - | - | |
| Cind3g05625 | 460 | Pfam | Methionine gamma-lyase | 59 | 458 | IPR009651 | - | |
| Cind3g05625 | 460 | SUPERFAMILY | PLP-dependent transferases | 78 | 457 | IPR015424 | - | |
| Cind3g05625 | 460 | Gene3D | - | 315 | 460 | - | - | |
| Cind3g05625 | 460 | PANTHER | CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME | 24 | 460 | IPR009651 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g05625 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr3:321489159 | Cind5g00867 | Cind-Chr5:91119352 | dispersed | |
| Cind | Cind-Chr3:321489159 | Cind8g00012 | Cind-Chr8:202517425 | transposed |