AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g05629 ATGGGGAAAACAGGAAGAGATTGGACTCAGATCTATACTATTTACGGAATGGAAGATTGGCATACACCAATTTTTCTATTAATTCACGCCATCGTTTTTTCGGCTTCTTCGGTCGGGTTTTTGTTGTACTTTAACTGGATCTGTTACTCGTTTGAAATGATTTCCCCGTCGCTGTTTTCGAACAGTGTTGCGAGGTTTGCGGCGGGGTTTACTGGCTCTGTGACCGCTCTTTCGGCTGTTTGTTTGTTTTATGCTGCGGGGAATATGTTTTACTCATCCGTTGCGCTGCGTTGGGACATGGCGCAACGGATGGTTAATGCGGTACATGACTGGTCTACGGTCAAGACCGTGTTGGATGTCGGGTGCGGCCGGGGGATTCTTTTGAATACGGTCGCGATGCAGCTTAAGAAGGAAGGAAGTTCGGGCCGGGTTGTTGGGTTGGATAGGAAAAATACAACGTTGTCGACTTTAAGGACTGCAGGTATGGAAGGAGTGCAGGAATACGTCACGTGCCGCGAAGGTGATGCGCGACGCCTCCCATTCCCCGACAACTACTTTGACGTGGTTGTATCCGCGACTTTTGTCCACAAAGTGGGCAAAGAATTCGGGACAAAAACCGCGGCCGCATCCGCAGAACGGATGCGCGTGGTAGGCGAAGTAGTCCGAGTACTAAAAGAAGGCGGTGTAGGGGTGGTATGGGACTTGGTACATGTCCCAGAGTATGTACTTCGTTTACAAGAATTAAAAATGGAAGACATAAGAGTGTCGGAAAGAGTAACGGCGTTTATGGTGAATAGTCATATTGTGTCATTTCGTAAGCCCACACAGCACGTGTTGGGCCCCAATGAAGTGAGATTAGATTGGAGATTTAACAATATCTGTTGA 885 48.02 MGKTGRDWTQIYTIYGMEDWHTPIFLLIHAIVFSASSVGFLLYFNWICYSFEMISPSLFSNSVARFAAGFTGSVTALSAVCLFYAAGNMFYSSVALRWDMAQRMVNAVHDWSTVKTVLDVGCGRGILLNTVAMQLKKEGSSGRVVGLDRKNTTLSTLRTAGMEGVQEYVTCREGDARRLPFPDNYFDVVVSATFVHKVGKEFGTKTAAASAERMRVVGEVVRVLKEGGVGVVWDLVHVPEYVLRLQELKMEDIRVSERVTAFMVNSHIVSFRKPTQHVLGPNEVRLDWRFNNIC 294
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g05629 294 PANTHER EXPRESSED PROTEIN 1 289 - -
Cind3g05629 294 Pfam Methyltransferase domain 118 230 IPR013216 GO:0008757(InterPro)
Cind3g05629 294 Gene3D Vaccinia Virus protein VP39 75 273 IPR029063 -
Cind3g05629 294 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 91 245 IPR029063 -
Cind3g05629 294 CDD AdoMet-MTases 116 236 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g05629 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
67810 Cind2g06216 Cind3g05629
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr2:334947536 Cind3g05629 Cind-Chr3:321824977 wgd