Gene detail

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Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g05633	CAAATGCTCTTCTTATTTCATATTTCATATCAGACAATTTACTTAGTATATGTACTTACTAAACCTGATGATGATCAATCAAACAAGATGGCGAAAAAAGTTTATGCTAGACTTGAAGTTGATTTCAACTCAAGAAAGAGGGAACGATGCGTCAAATTTGATCAATTTGAACCTGAAGCAACTTTTTGGGAAGACTTGGAACTAAAACTCACGGACTGCCTCAAAAACACTTTTGAAAAGCGCATCCAGTTCTATGAGGACGAGCTTCGTAAACTCAGTGAACAACGTATAATGCCAGTTTGGAGCTTCTGTAATTATTTTATTCTCAAGGAAAGCCTTGCATTCATGTTTGAAATGGCTCATCTATACGAAGACTCATTGCGGGAATATGATGAACTAGAGATCTATTACTTACAAACAGTTAATTATGCTGCTGGCATACGTAAGGACTTTGGAGGAATGGAGCATGGAGACGATCAATCTGCAATGCTAAAAGCTGGAAACAAACAGCTGACACAGATAGTTCAAGATAGTTCCTTTAGGGAGTTTGAATTTCGACAGTACTTATTCGCTCGTCAAGCTAAGCTGTTGTTTAATTTACAACGACCATTTGAGGTTGCATCAAGGGGCTATTCATTCATAGTTAGTTTCTCGGAAGCATTAGCTCTACATGAGAGTATCTTGCCCTTATGTACAAGGGAAGTATGGGTCCTAACCTCGTGCTTGAGCTTGGTCAATGCAACTGCTGACCATCACAAAGATGGAATAGTGACACCAGAAATAGAAAAAGAATATTATCGTATGCTTGGAGAACTATATTCTCTATCCCGAGTTAAGTTCATGAGACTTGCATATTTGATTGGGAACGGGTGTAATATAGAAAGAAGTCCAGTCAACAGTGCTTCACTTAGCATGGTACCTTGGCCTAAGCCAGCAACTTGGCCTTCAGTTCCTTCTAATGCTTCATCTGAGGTTGTTGCGCAAGAAAAGATGATTCTTCAAGATAAACCAAGGATGAAGCATTTTGGTATTCATAGAAAACAGTTGCCTCTTGAACCTTCTTTTCTTCCGCATGAGGCTAATCGTCGAAGACCGTCTAGTTCTGTTGGAAATATGTTTGAACTGTCAGGCAACTCAGGTTCAGAAGCAGAGACATTTTCTTCACTTACACCACCTCCATCTTCGGTGTCAAGGACCACCTCTATACCAGTAAACTTTGAGAGCACGGTTGATACCATGAGACTAGCGGAATTTTTTGTGGCTGCCAAGCATGCTCTCTGTAAAACTATTTCTGATCCTAGTTTGTGGAAATCATTAACATCGTTAGGGGACTTTGAGAAAATGTATATGGAGCTATCTAAGGGTGCTTCTGATAATTATCATCTTTCATGGTGGAAAAGACACGGGGTTGTTCTCGAGGGTGAAATTGCAAATATTTTATTTAAACATGGTAATTACGATCTAGCAGCAAAATTATACGAAAAAGTTTGTGCTCTTTACTCTGGTGAAGGATGGCAAGATTTATTAGCAGACTTGCTTCCTAATTTAGCTGAATGCCAAAATATACTCAATGATCAACCTGGTTACCTATCATCCTGTGTGAGATTACTTTCACTTGACAAAGGTTTATTTTTGACTAATGAGCGCCAAGCTTTTCAGTCAGAAGTAGTCCGTCTAGCACACGGTGAAATGAGTGACCCGGTGCCTCTAGATGTGTCATCATTAATAACATTTTTTGGCAATTTGGGTCCACCTGTGGAGCTATGTGACGGTGATCCGGGTACCTTACCTGTAACATTATGTAGCGAATTCCCAGATGACATCACTCTTGAATCACTTAGTCTTACTTTGAATGCTACCAATAACGCCGATGAACGTGTTAAGGCGATCAGGACCTGTGGTGTGACGATATTGAACCCTGGTAGAAATACAATTACCCTTTCGTTGCCCCCACAGAAACCTGGCTCCTATGTCTTGGGTGTTCTTACAGGGCAGATTGGTCATTTACGATTTAGGTCTCATGGTTATTCCAGAGGTGGACCTGCAGATATTGATGATCTTATGAGTTATGATAAGCCAACGAGGCCGATTTTAAAGGTGTCCAAACCAAGGCCTCTTATTGATCTTGCTGCTGTGGTTTCGTCTGCATTACTGATGAATGAGCCTCAGTGGGTTGGGATAAGTGTTACACCATTAAATTACTCCCTTAAGGATGCAATTTTGCACATTGAAAGTGGTCCAGGGTTAAAAATTGAGGAGTCACGTGCCATTGAAATGGAAAACTATGTTGATACATCATGTAATGCAGATGGATTGAGGGATACAAATGGTGATAGTAATAATGCTGCTTCTCTAACAAAAGAATTTGCAAAACTTACTTTAAGGGATGGTAGTATTGAGTTACCAGACTGGGCCAGCAGTATCGTTAGCGTTATATGGATTCCGGTTTGTGCCACTAGTGAATCGCTGGCAAAAGGAATATCTTCAGGGGCAATCTCTTCACAAAGAACGAGTGTGGTTGATGGACTGAGGACCTTAAATCTGAAACTTGAATTTGGCGTGTCTCATAATCAGATATTTAAAAGGACTGTGCCTGTTCATTTCACTGACCCGTTCCACATCAGCACACTTGTAGCAGACCAGGGCAGTGATGGTGCTTTGCTTTTACAGGTGATACTAAACTCACAGGTAAAGGCCTCGTTAACTATTCATGATGCTTTGTTAGATCTACAAGATGGTTTTTCTCATACCACAAAAGGTGATGGGAGACCAACGTCTAACTTGTTGCCGCTTGTGGTTCCTGCAACATCTAGAACTGGAATTTTCTTTGGTATATCCATGGGAACTACAACCACCGAAGATGAAGGGAAAGTGGTGCATCCTGATACAATATTAAATATTAAATACTCAGTTTCTGGCGATAGAAACATAGGATCTCATACTCCTGTATCTCTGGAAACTAAAGACTCGAAGGGTGATGAAAAACCGTTGTTGTTGACATTCAGGAGTGTTCTAGTTATACGACGGCCGGTGTTGGAACCTTTTTTGGTTGTTGGTTTTGTTCCTCTTCCTTCAGATGGACTTAGAGTTGGGCAGGTAATCACAATGAAATGGAGAGTGGAAAGGTTGAAGTATGTGGACGAGGAGTTATTGTATGAAGTCAAGGCGAACACAAAAAATTGGATGATTGCTGGTAGGAAACGAGGCCATGCCACTCTCTCCACAAAGCAAGGTGCGTTATAA	3243	40.7	QMLFLFHISYQTIYLVYVLTKPDDDQSNKMAKKVYARLEVDFNSRKRERCVKFDQFEPEATFWEDLELKLTDCLKNTFEKRIQFYEDELRKLSEQRIMPVWSFCNYFILKESLAFMFEMAHLYEDSLREYDELEIYYLQTVNYAAGIRKDFGGMEHGDDQSAMLKAGNKQLTQIVQDSSFREFEFRQYLFARQAKLLFNLQRPFEVASRGYSFIVSFSEALALHESILPLCTREVWVLTSCLSLVNATADHHKDGIVTPEIEKEYYRMLGELYSLSRVKFMRLAYLIGNGCNIERSPVNSASLSMVPWPKPATWPSVPSNASSEVVAQEKMILQDKPRMKHFGIHRKQLPLEPSFLPHEANRRRPSSSVGNMFELSGNSGSEAETFSSLTPPPSSVSRTTSIPVNFESTVDTMRLAEFFVAAKHALCKTISDPSLWKSLTSLGDFEKMYMELSKGASDNYHLSWWKRHGVVLEGEIANILFKHGNYDLAAKLYEKVCALYSGEGWQDLLADLLPNLAECQNILNDQPGYLSSCVRLLSLDKGLFLTNERQAFQSEVVRLAHGEMSDPVPLDVSSLITFFGNLGPPVELCDGDPGTLPVTLCSEFPDDITLESLSLTLNATNNADERVKAIRTCGVTILNPGRNTITLSLPPQKPGSYVLGVLTGQIGHLRFRSHGYSRGGPADIDDLMSYDKPTRPILKVSKPRPLIDLAAVVSSALLMNEPQWVGISVTPLNYSLKDAILHIESGPGLKIEESRAIEMENYVDTSCNADGLRDTNGDSNNAASLTKEFAKLTLRDGSIELPDWASSIVSVIWIPVCATSESLAKGISSGAISSQRTSVVDGLRTLNLKLEFGVSHNQIFKRTVPVHFTDPFHISTLVADQGSDGALLLQVILNSQVKASLTIHDALLDLQDGFSHTTKGDGRPTSNLLPLVVPATSRTGIFFGISMGTTTTEDEGKVVHPDTILNIKYSVSGDRNIGSHTPVSLETKDSKGDEKPLLLTFRSVLVIRRPVLEPFLVVGFVPLPSDGLRVGQVITMKWRVERLKYVDEELLYEVKANTKNWMIAGRKRGHATLSTKQGAL	1080

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g05633	1080	Coils	Coil	75	95	-	-
	Cind3g05633	1080	PANTHER	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1-TMEM1	16	1079	IPR045126	GO:0006891(PANTHER)\|GO:0034498(PANTHER)\|GO:0048193(InterPro)\|GO:1990071(PANTHER)\|GO:1990071(InterPro)
	Cind3g05633	1080	MobiDBLite	consensus disorder prediction	378	398	-	-
	Cind3g05633	1080	SUPERFAMILY	TPR-like	475	529	IPR011990	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g05633	K20307	trafficking protein particle complex subunit 10

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr2:371262587	Cind3g05633	Cind-Chr3:321920448	transposed
	Cind	Cind-Chr4:98325352	Cind3g05633	Cind-Chr3:321920448	transposed
	Cind	Cind-Chr6:47426504	Cind3g05633	Cind-Chr3:321920448	transposed
	Cind	Cind-Chr1:369935362	Cind3g05633	Cind-Chr3:321920448	wgd