Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g05648	ATGGGGAAAAAACGAAAGCACGCAGAAGTGGTAGCAGCGCCGGAGAAGAAAGATAACGTGGCACCGGAGAGACCACCTAGGACACTTTTTGGCTGGAAAAATAAACCAACTGAAAATGATCAACAAACTTTCAGGAATAAAGAGAAAGTTCTTGTTACTTGTTCTCGTAGGATCAATTACAGGTATCGACATTTGATGTTGAATTTGGTGTCGATTTTACCTCATTGCAAGAAAGATAACAAAGTTGAGTCTAAAGCTACCAAAGGTGCAACTCTGAATGAGCTTGTTGAACTCAAGAATTGTTCTTCATGTCTCTTTTTTGAGTGTAGGAAACACAAGGACCTTTACTTGTGGATGTCAAAGTGCCCAAATGGTCCATCTGTGAAGTTCTTGAATGCAGTTCACACAATGGAAGAGTTAAAGCTCACTGGGAATCATCTTAAAGGCGCACGCCCTCTTCTTACTTTTTCATCAAATTTTGATAAAGACCCACACTGGAAACTTCTCAAGGAGATGATTACTCAGATATTTGGAACTCCAAAGGAGCACAGGAAATCAAAGCCCTATTATGACCATGTATTTGTGTTCTCTATCGTTGATGACCACATATGGTTCCGTAATTACCAGATATCGTGTCCACATACTGGAGATGATAAAATCGATCGAGGGGGCCTTGACAAGATGACCCTTATTGAGGTTGGTCCAAGGTTTTGTTTAAATCCAATCAAGATATTTGGTGGTAGCTTTGGAGGTCCAACTCTATATGAGAATCCGTTTTACGTTTCACCAAATCAGATACGGTCATTGGAGAAGAGAAAGAAGGCTGAGCTCCAGAGCACAACCGAGGCAATGACGGGTTCTCCGCTCGCTGTGCGGGATGGAGCGACGACAGTTTTGAGAATTCAAGAGAAGCCCTCGATCACCTCACTTCCCATCTCCGCGACCATTCACGACGCCTTAAACGAACTCAAATCATCTGAAGACACTCACATAAGTATATGGACTTGCACCCACAACCATTTAGTATCTGATGATCATCAACTCATTAGTGAGTGCCGATGTGTTGGAAAAATATGCATGGTCGATATCATATGTTATCTTTGCAAAGAGGACAACATCACTGATCCTTCGACAGCACTTAAGTCTCCTGTTTCGGTTTTGATGTCACATGGTCGTCCTGGTGTTATTCAACATGTGGAACCGTCCTTCAGTTTGCTTGAAGCAATTGATGTTATCATCAATGGTGCACAAAACCTCGTGATACCGATAAAAAACAAAGCCACAAAAAGAAAACAGCTTCGGCAATACCCAACAAGTGCTCCTACGACTCACGTAGGTGGTCGTGAGTTTTGTTGGCTAACACAAGAAGATGTCGTTCGGTTTCTATTAAGCTCAATCGGTTTATTCTCCCCTACTGCGGCTTTTTCAATCGAGTCACTCGGTATTATCACCACTGACTTCCTCACAATCAACTACCATTCGCCCGCATCAAAAGCGGTCCATGCAATCGCATCCTCTCTCGTGGAGCAAACATCTGTCGCGGTTATTGACGATGATGGTGTGTTGATAGGGGAAATATCGCCTTTTACGCTAAATTATTGTGATGAAATGGTTGCGGCTGCTATTACAACGTTGTCTGCGGGGAACTTGATGGCGTATATAGATTGTGGGGGTCCACCAGAAGATATTATAAAGCTGGTGGAAGAGAGATTGAAAGAGAGGAATTTAACTGGAATGCTGGAAGAGTTTTCTGTTTACTCCTCCGACATTCCATACCGTAGTAATAACGCGTCCTCAGATGAGGAATCGATACCTTCACCAACCACAACTAGGTCCGGAAGGCATAATCGGTCAAGTAGCTACTCCACGAGGATAATGAGGAGGTCGGAGGCTATTGTGTGCTATCCTGGAAGCTCGTTGGTGGCGGTGATAATTCAGGCGATTGCACATCGTGTGAGTTACGTGTGGGTGATTGAAGAGGATTGTAGCGTGGTCGGAATAGTTAGGTTTTGCGGCATGTTGGAAGTTTTTCGAGAACATTTAGAGCGTATGATTAACTAG	2061	43.43	MGKKRKHAEVVAAPEKKDNVAPERPPRTLFGWKNKPTENDQQTFRNKEKVLVTCSRRINYRYRHLMLNLVSILPHCKKDNKVESKATKGATLNELVELKNCSSCLFFECRKHKDLYLWMSKCPNGPSVKFLNAVHTMEELKLTGNHLKGARPLLTFSSNFDKDPHWKLLKEMITQIFGTPKEHRKSKPYYDHVFVFSIVDDHIWFRNYQISCPHTGDDKIDRGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPFYVSPNQIRSLEKRKKAELQSTTEAMTGSPLAVRDGATTVLRIQEKPSITSLPISATIHDALNELKSSEDTHISIWTCTHNHLVSDDHQLISECRCVGKICMVDIICYLCKEDNITDPSTALKSPVSVLMSHGRPGVIQHVEPSFSLLEAIDVIINGAQNLVIPIKNKATKRKQLRQYPTSAPTTHVGGREFCWLTQEDVVRFLLSSIGLFSPTAAFSIESLGIITTDFLTINYHSPASKAVHAIASSLVEQTSVAVIDDDGVLIGEISPFTLNYCDEMVAAAITTLSAGNLMAYIDCGGPPEDIIKLVEERLKERNLTGMLEEFSVYSSDIPYRSNNASSDEESIPSPTTTRSGRHNRSSSYSTRIMRRSEAIVCYPGSSLVAVIIQAIAHRVSYVWVIEEDCSVVGIVRFCGMLEVFREHLERMIN	686

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g05648	686	Pfam	Brix domain	55	243	IPR007109	GO:0006364(InterPro)\|GO:0019843(InterPro)
	Cind3g05648	686	SUPERFAMILY	CBS-domain pair	474	682	IPR046342	-
	Cind3g05648	686	MobiDBLite	consensus disorder prediction	1	23	-	-
	Cind3g05648	686	MobiDBLite	consensus disorder prediction	1	28	-	-
	Cind3g05648	686	PANTHER	RIBOSOME BIOGENESIS PROTEIN BRIX	2	279	IPR026532	GO:0000027(PANTHER)\|GO:0003723(PANTHER)\|GO:0005730(PANTHER)
	Cind3g05648	686	SMART	Brix-2	51	244	IPR007109	GO:0006364(InterPro)\|GO:0019843(InterPro)
	Cind3g05648	686	ProSiteProfiles	Brix domain profile.	48	250	IPR007109	GO:0006364(InterPro)\|GO:0019843(InterPro)
	Cind3g05648	686	SUPERFAMILY	Class II aaRS ABD-related	49	247	-	-
	Cind3g05648	686	MobiDBLite	consensus disorder prediction	594	622	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g05648	K14820	ribosome biogenesis protein BRX1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:9662364	Cind3g05648	Cind-Chr3:322667759	dispersed
	Cind	Cind-Chr3:287769818	Cind3g05648	Cind-Chr3:322667759	dispersed
	Cind	Cind-Chr3:322667759	Cind6g02212	Cind-Chr6:156966956	transposed