Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind3g05657 | ATGACTGGACTGTCATTGGATATAAGAACACAGAGTTATGCATCACCTCAGCAGCCGCAGAATGGTTCATTGCAGACTCAAAATGGGTTCATTGTACGCAAGTCTTCGAGGATGTCGTTGTCTGGTTCGAGAGAGAAGGATAGATTTCTTACATTTTTGTGCAGATATTTAAGTAGAAAGAAGGTTGTAATGATGATTTTAATGTCATTTGCTCTCATGGCTTTCTTGTCGGGGTTCTTTACCTCCAATAGAGAAGCTGCATCAGAGCGCACGATCTTCAATCCCTTTAACGAGACATTTAATACCTCTTTCCAGTTTGCTAGATTTGATAATCAGAAATACAATAATTCTTCCATGGAGACAACTCTGTCTGTATGTGAAGTGAACCCCCCTACCCGTCGTTATTCGGATGCATCACTTTCTACAGGATCCGTTCTTTCTCATAGCAATTTGTGTAAGAATTTTGCATTTCCTCCTCCTCCTCCAGGTGATAGGAGACGACCTGGACCTCGACCTTGTCCTGTATGTTACCTTCCAGTGGAGGAGGCTATGGCTAGCATGCCGAACTCACCGTCACCATCACCGGTGCTTCATGAGTTAAACTATTTCCATGAGGGGACATCTACTAAAACTGAACCACATGAAGGCTCTGACTTTGGTGGGTATCCTTCCTTAAAGCAAAGGAATGAATCTTTTGATATTAAAGAATCCATGGCTGTGCATTGTGGATTTGTAAAAGGATGCAGACCTGGTTACCAAACTGGATTTGATATTGATGTATCTGATCTTGTGGAGTTGGAGCAGTATCATGATATCATTGTTGCATCGGCCATATTTGGAAACTATGATGTAATTCAACAGCCAACTAAAATTAGCGAGGCTGCAAGTAGAAACATTCCGTTTTATATGTTTATTGATGAAGAGACTGAAGCATATATGAGAAACTCTAGTGCTTTGGACTACAGAATGAAGGTTGGATTGTGGAGAATTATTGTTGTGCACAACATACCTTACACTGATTCGAGACGCAATGGAAAGGTCCCCAAGCTTCTACTACACAGACTCTTCCCAAATGTCCGGTATTCTATATGGATTGATGGGAAGCTGCAACTCGTTGTGGACCCATATCAACTTCTAGAGAGGTTCTTGTGGCGCAACAATGCGACTTTTGCAATTTCAAAACATTATAGGCGATTTGATGTGTTTGAAGAAGCTGAAGCTAATAAGGCTGCCGGGAAATATGACAATGCGTCCATTGATTACCAGATTGATTTTTACAGAAATGAGGGTTTAACACCATATTCTGAAGCTAAACTTCCCATAATCAGTGATGTTCCTGAAGGGTGTGTAATCATACGGGAACACATTCCGATAACAAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGCTTTACTTCAAGGGATCAGTTAAGTTTTGCTATTGTAAGGGACAAAATTATGGCTCAAGTCAATTGGAGCATCAATATGTTTATGGATTGTGAAAGACGGAACTTTGTGATACAGGCATACCACCGGGATCTACTAGAGCATATGCCACCTCCTGCACCTAAAGTGATTAATTTAAGGCGGACCCGATCTCCTATTCCTGTTCCTGTATCTGTGCGAGTTAATTCACCTGCTAGATATTCAGTAAAGAAAAACCCTGTTCGACGGAAAGGTGAAAGGAGACCTCGTTCAAGGAGACATCCAAAAAATCCCAGTAATAGGGACAACACGGTCTTTTGA | 1752 | 41.32 | MTGLSLDIRTQSYASPQQPQNGSLQTQNGFIVRKSSRMSLSGSREKDRFLTFLCRYLSRKKVVMMILMSFALMAFLSGFFTSNREAASERTIFNPFNETFNTSFQFARFDNQKYNNSSMETTLSVCEVNPPTRRYSDASLSTGSVLSHSNLCKNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMASMPNSPSPSPVLHELNYFHEGTSTKTEPHEGSDFGGYPSLKQRNESFDIKESMAVHCGFVKGCRPGYQTGFDIDVSDLVELEQYHDIIVASAIFGNYDVIQQPTKISEAASRNIPFYMFIDEETEAYMRNSSALDYRMKVGLWRIIVVHNIPYTDSRRNGKVPKLLLHRLFPNVRYSIWIDGKLQLVVDPYQLLERFLWRNNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQIDFYRNEGLTPYSEAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFAIVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAPKVINLRRTRSPIPVPVSVRVNSPARYSVKKNPVRRKGERRPRSRRHPKNPSNRDNTVF | 583 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind3g05657 | 583 | PANTHER | ALKALINE CERAMIDASE-RELATED | 36 | 540 | IPR006852 | - | |
| Cind3g05657 | 583 | MobiDBLite | consensus disorder prediction | 550 | 583 | - | - | |
| Cind3g05657 | 583 | Pfam | TOD1-MUCI70, glycosyltransferase-like domain | 200 | 513 | IPR048354 | - | |
| Cind3g05657 | 583 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
| Cind3g05657 | 583 | MobiDBLite | consensus disorder prediction | 554 | 572 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind3g05657 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr3:10364986 | Cind3g05657 | Cind-Chr3:323203279 | dispersed | |
| Cind | Cind-Chr3:323203279 | Cind5g01194 | Cind-Chr5:159526377 | dispersed | |
| Cind | Cind-Chr3:323203279 | Cind6g02232 | Cind-Chr6:156077340 | transposed |