AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g05663 ATGGAACCCCAAGAAAACCACCACCCATCTCCAGCCAACTCACCATCATCCAACTGCAGCACCACCATACAAACACCACCATTAACACCACGACCCATCCAAAGATCCGACCCAAATCCATACCCTACCACCTTTGTTCAAGCTGACACTTCTTCATTCAAACAAGTTGTCCAAATGCTAACTGGTTCATCCCAACAAGATTCATCATCAAATGGGTCAAACGGGTCAAATGGGTCCAACCCATCAAAGGTATCAATCCCACCTGTGAAAAAACAAAGCTTCAAGCTATATGAACGCAGGAACAGTTTGAACTTGAAAAACGGGTTGATGATAAACCCAATGGGTCCAAGATTCGGGTCAAGTTCATCATCTCCAAGGGTTCAAGAGCTTTTGTCACCAAGTATACTTGATTTTCCATCCCTGGTGTTGAGTCCAGTTACACCATTAGTTGAAGATCCATTTGATAAAAAAGAAGAAGAAAGGGTTATTAAGGAAAAAGGGTTTTATTTACATCCGTCACCCAGAGCAGTGGCAACAGCACGTGGCTCTGCTGCTGAGCCACGCTTGTTGCCACTTTTCCCGTTGACGTCCCCGAGATCATCGTTGAGTTAG 612 44.77 MEPQENHHPSPANSPSSNCSTTIQTPPLTPRPIQRSDPNPYPTTFVQADTSSFKQVVQMLTGSSQQDSSSNGSNGSNGSNPSKVSIPPVKKQSFKLYERRNSLNLKNGLMINPMGPRFGSSSSSPRVQELLSPSILDFPSLVLSPVTPLVEDPFDKKEEERVIKEKGFYLHPSPRAVATARGSAAEPRLLPLFPLTSPRSSLS 203
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g05663 203 MobiDBLite consensus disorder prediction 1 93 - -
Cind3g05663 203 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 18 201 IPR039611 -
Cind3g05663 203 Pfam VQ motif 40 66 IPR008889 -
Cind3g05663 203 MobiDBLite consensus disorder prediction 38 87 - -
Cind3g05663 203 MobiDBLite consensus disorder prediction 7 30 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g05663 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:10771665 Cind3g05663 Cind-Chr3:323511214 dispersed
Cind Cind-Chr3:323511214 Cind4g05170 Cind-Chr4:321850259 dispersed
Cind Cind-Chr3:323511214 Cind6g02245 Cind-Chr6:153855929 transposed