AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind3g05808 ATGCAAAGACACCGTAACCAATCTAACGGATTCCGTTCAAACGGTCCAGTGTACCGGAATTACAACAACCGCGGCGGCGGCGGCGGTTACCGGGGCCCACCGCCGCCACGTAGGATTGATGTTTTTATGGAAGCTGGTAGGTTAGCTACTCAGTATTTACTTGCTAAAGGTTTACTTAATAATAATAATTATAATAATAAAGGGCAAAATAATTATAGTACTAATAATGATGTTAATGATGTTAAGAGTCCGGTTGTTGTTTCGGATTTACGAGATGAGAGTAAGGTTGTTAGGAGGACTGTTAAGGATCCTAGAATTGAGCTGAGTAATAATGAGATTAGTAAGAATTCGGAGAAAATAGGTGAGGGCGATGAGGCGGTTTTAGGTGGTGAGGAGGTGAAACCGGTGGTGTCGGGTGCTTTAGAATTAAGGAATGTGGAAACGAAAGTTGCGAATGAAGAGAAGGAATTGCGTGATGAGGATGTGGGCGTCGAGGCGCCAGTTTTGGAAGTTACGAAGATGGAAGGTGTCGAGTCCGAGGAGAAAATTGATGATGTTAAGAATGTATATGTGAAGACGGAGGATGATGTGATGATGGATGATGGTGATAAAAAGGATGAAAAGACGGTGGTTGAAGAAGACGTGATGGAAGAGAATGAGAATGAGAATGGGAAGGATAGTGGTAGTGATTTGTTGACGTTGATTAGGGATGATAATGTACCGACTAGGACTCGTTCTTCTCTGACTCTTAAGGGGTCCAAAAGTGATCCGGTATTGATATCCGGAGATGAAAATAGGACGAAAGAACAGAATTTGGAAGAAGCTGAACCCAAACCTGAACCTGAACCTGAACCTGAACCTGAACAAGGATTGGAAATGAAACTTGAACCCAAGGTTAAACAACTGACTTGTGATGAGGATGACATGTACAAATTTGGACTAGGGTTACATATGCGGTCTCAGTCGTTTCCTCAAAGATCTGTTTCCGAGCTAGCAATAAGTGACGGGCATCAGGAGTATAGTAGAAGCAGTTCTGATGTATTGGGTAGAGGTGAAAAACGACCATTGGAAATTAATGATTTCACGGATATATCTAAGAAACCTAGGGATTGGGCCTCTGCAAGTCCTCCACCGCATAATTACTTTAATCTTTCAAGCTCAAGAGGAGATCAGTCGTCTTCTCACGAGGGTGGTTCTTATGCAGAAGAGAAGCAGCTCTTTCCCAACTCGTTTAAGATATGTGACCTTAATTTAACGGGAGGTTCGGAAGCAAATGAAAATCGTGATACGAAGTCTGCCATTGGGTTTTTGCCACAAGCAAAGCAGGAACCGGTGTCGGTTGACTTTGACTTGACTATGAATAATAGCTGTGGTATAGTTGATAGACATGTTAGGCGTGGAATTGATGGCAAAGGGGTTGAAGTCATTGACTTGGATTGTGATTCCGTGCAAGACGGCAACAATAACTCAGACCGGAGGCAAAGCTTTCCGGACAATATACAAAGGGTAAGTGACCTTCCCCAAGATGGTTACGGTCTTATGATATCGGAGTTGCTAGATGCTGATATTCCTAATTCAAGTGTATCAACGGGCGTTAATTCTATGCATAATGAAATGAGCCTCCAAAATGAGGAGGGGATTCTTGGTGATGATGACTCGATATATATGTCACTGGGAGAAATACCAATAAGTTTCGTGCCAGTCTGGGATCAGCAGCCTTCACAAAGATATGATAAGCGCTATTAA 1746 42.73 MQRHRNQSNGFRSNGPVYRNYNNRGGGGGYRGPPPPRRIDVFMEAGRLATQYLLAKGLLNNNNYNNKGQNNYSTNNDVNDVKSPVVVSDLRDESKVVRRTVKDPRIELSNNEISKNSEKIGEGDEAVLGGEEVKPVVSGALELRNVETKVANEEKELRDEDVGVEAPVLEVTKMEGVESEEKIDDVKNVYVKTEDDVMMDDGDKKDEKTVVEEDVMEENENENGKDSGSDLLTLIRDDNVPTRTRSSLTLKGSKSDPVLISGDENRTKEQNLEEAEPKPEPEPEPEPEQGLEMKLEPKVKQLTCDEDDMYKFGLGLHMRSQSFPQRSVSELAISDGHQEYSRSSSDVLGRGEKRPLEINDFTDISKKPRDWASASPPPHNYFNLSSSRGDQSSSHEGGSYAEEKQLFPNSFKICDLNLTGGSEANENRDTKSAIGFLPQAKQEPVSVDFDLTMNNSCGIVDRHVRRGIDGKGVEVIDLDCDSVQDGNNNSDRRQSFPDNIQRVSDLPQDGYGLMISELLDADIPNSSVSTGVNSMHNEMSLQNEEGILGDDDSIYMSLGEIPISFVPVWDQQPSQRYDKRY 581
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind3g05808 581 MobiDBLite consensus disorder prediction 192 212 - -
Cind3g05808 581 MobiDBLite consensus disorder prediction 261 300 - -
Cind3g05808 581 MobiDBLite consensus disorder prediction 1 20 - -
Cind3g05808 581 MobiDBLite consensus disorder prediction 1 38 - -
Cind3g05808 581 MobiDBLite consensus disorder prediction 329 345 - -
Cind3g05808 581 PANTHER PROTEIN, PUTATIVE-RELATED 3 82 IPR040276 -
Cind3g05808 581 MobiDBLite consensus disorder prediction 378 399 - -
Cind3g05808 581 MobiDBLite consensus disorder prediction 239 254 - -
Cind3g05808 581 MobiDBLite consensus disorder prediction 346 367 - -
Cind3g05808 581 MobiDBLite consensus disorder prediction 329 400 - -
Cind3g05808 581 MobiDBLite consensus disorder prediction 192 300 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind3g05808 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr3:304582144 Cind3g05917 Cind-Chr3:305253765 proximal