Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cind3g05814	ATGGATAAATGTTTAGTGTTTTTCTTTGCAAGTGTTTTGGTCCTTTTCGTTCTTGCGATATCAGATATAGAAGCGGCCGCACCTCCAAAATTAACATGTGAAAAAATGAGTAAGACGTATTCAGGACCGTGTGACAACAAGAAGTGTGACCAAAAGTGCAAAGGTTGGGAGAAATCAGAGCATGGTGCTTGTCATATACGGGAAGGAAAAAATGGATGCTTTTGCTACTATGATTGTACAAATAAATCACCTCCAGGCAAAGACAAGTCAAAGCCTCCTTCTAAAGGTGGCGGAGCCGGTGGTGGTGGTGGAGGAGGAGGTGGTGGTGGAGCTGGTGGAGGAGGAGGATCTGGAACTCCAGGAGCTCCAGGTAGCGGAGGAGGATCTGGAGCTCCGGGTAGCGGCGGAGGATCTGGAACTCCAGGTGGTGGCAGTGGATCTGGTGGTGGTGGTGGATCTGGTGGTGGAGGAGGATCTGGAACTCCAGGAGCTCCGGGTAGTGGAGGAGGAACTGGAGCTCCGGGTAGCGGAGGAGGATCTGGAACTCCAGGTAGTGGCGGAGGATCTGGAACTCCTGGAGCTCCAGGTAGCGGAGGAGGATCAGGAGCTCCGGGTAGCGGAGGAGGATCTGGAACTCCAGGTAGTGGTGGAGGATCTGGAACTCCAGGTGGTGGCGGTGGATCTGGTGGTGGTGGTGGATCTGGTGGTGGAGGAGGATCTGGTGGTGGTGGTGGATCTGGTGGTGGAGGAGGAGGTGGTGGTGGAGGGGGTAGTGGTGGAGGAGGGTCATCGCCGCCAGGGGATAAACCGTGTAAACACATTGTTGATTAG	831	54.27	MDKCLVFFFASVLVLFVLAISDIEAAAPPKLTCEKMSKTYSGPCDNKKCDQKCKGWEKSEHGACHIREGKNGCFCYYDCTNKSPPGKDKSKPPSKGGGAGGGGGGGGGGGAGGGGGSGTPGAPGSGGGSGAPGSGGGSGTPGGGSGSGGGGGSGGGGGSGTPGAPGSGGGTGAPGSGGGSGTPGSGGGSGTPGAPGSGGGSGAPGSGGGSGTPGSGGGSGTPGGGGGSGGGGGSGGGGGSGGGGGSGGGGGGGGGGGSGGGGSSPPGDKPCKHIVD	276

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cind3g05814	276	MobiDBLite	consensus disorder prediction	84	276	-	-
	Cind3g05814	276	PANTHER	DEFENSIN-LIKE PROTEIN 1	1	79	-	GO:0006952(PANTHER)
	Cind3g05814	276	Gene3D	-	30	79	IPR036574	-
	Cind3g05814	276	PRINTS	Eggshell protein signature	168	186	-	-
	Cind3g05814	276	PRINTS	Eggshell protein signature	9	25	-	-
	Cind3g05814	276	PRINTS	Eggshell protein signature	129	139	-	-
	Cind3g05814	276	PRINTS	Eggshell protein signature	41	52	-	-
	Cind3g05814	276	PRINTS	Eggshell protein signature	101	116	-	-
	Cind3g05814	276	SMART	gth-4	32	79	IPR003614	GO:0006952(InterPro)
	Cind3g05814	276	SUPERFAMILY	Scorpion toxin-like	32	79	IPR036574	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cind3g05814	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cind	Cind-Chr3:359252425	Cind3g05814	Cind-Chr3:358610006	dispersed
	Cind	Cind-Chr3:359209262	Cind3g05814	Cind-Chr3:358610006	dispersed

Gene Family Members

Select	Gene	Event_type	S_start	S_end	Function	Ath_gene	Identity(%)	E-value	Score
	Cind2g02861	.	1	77	Plant Defensins gene family	AT2G02120	56.41	5.61e-30	99.4
	Cind2g04438	.	1	77	Plant Defensins gene family	AT2G02120	61.538	1.09e-31	103.0
	Cind3g03505	.	3	78	Plant Defensins gene family	AT1G19610	53.947	3.52e-24	86.7
	Cind3g03506	.	9	77	Plant Defensins gene family	AT1G19610	47.826	2.03e-19	77.4
	Cind3g03507	.	13	78	Plant Defensins gene family	AT1G19610	46.97	2.59e-16	67.0
	Cind3g03508	.	13	78	Plant Defensins gene family	AT1G19610	46.97	5.17e-16	66.2
	Cind3g05814	.	7	78	Plant Defensins gene family	AT1G19610	41.667	8.98e-13	60.8
	Cind3g05822	.	3	78	Plant Defensins gene family	AT1G19610	53.947	3.54e-26	91.7
	Cind3g05823	.	1	78	Plant Defensins gene family	AT1G19610	51.282	6.98e-26	90.9
	Cind3g05824	.	1	78	Plant Defensins gene family	AT1G19610	52.564	6.98e-26	90.9
	Cind3g05825	.	3	78	Plant Defensins gene family	AT1G19610	53.947	8.20e-26	90.5
	Cind3g05826	.	3	78	Plant Defensins gene family	AT1G19610	53.947	5.33e-26	90.5
	Cind4g01411	.	12	76	Plant Defensins gene family	AT1G61070	37.879	1.25e-11	52.8
	Cind4g01413	.	7	76	Plant Defensins gene family	AT1G61070	39.437	3.85e-13	56.6
	Cind4g01416	.	7	76	Plant Defensins gene family	AT1G61070	39.437	3.85e-13	56.6
	Cind7g00261	.	7	77	Plant Defensins gene family	AT2G02100	62.5	1.53e-29	98.2
	Cind9g03347	.	12	73	Plant Defensins gene family	AT2G02120	35.938	9.66e-08	43.1