AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind9g03635 ATGGAAGACAGCTTCAAAGTCCGAATAGACAAAACATTCGGCACCCTCTCACCCCAACAACAATCCTCACTCTGGTCCTTAACAGACGAAGAAATCCAACACAGCAAATGGATCCAACCAAAACCCAAACCCCAAAACGATGATCTTCTCAAAACCCCAAAAAAACCCTTTTCACCCTTTCTTCAAAGCCTTATTGACCAACCCTCATCTTCTGCTGATTTGCAGGCTGATATTCAAGAACTTGACACTGATGAAGATGATGATAGTGATGATGATGATGGTGATAAGAGGGATAAGGGGGAGATGGGTTTTGTTAAACCGGATGATCATAATAATGAAGAGTGGGATATTCGCGCTTCCGTTGGTTTGGACTGCACTCTTGACAATGAGGAAGAGGAGGATTGTTTTGACAAGGTTGCCGTAGGCAAGGAAGAATCCGCAGAACGCTTTTACATGAAAGATGTCAATGATTATGAAGTTGAAATGGATTCTAACATTGCGCTTCCCGGCTCGTTAACTGATGTAATCAAGGATCCTCGAGCAAATCACAAGGCAGCAAAACTAAGGATCAAAGAAGACTACGAATCCGCTAAAAAATTAGGAGCATGTAATGTTCCAGATCATGTTCTTAACCCTTCAAGATACACACACTATACATTTGATTCAGATGAAGAAGTTGATGAAGAGTCTAATCAAAAAGCTTGTATGGATTTCCTAAATACATTGAAGGGGTCTGCTGCCATGGAGATACAAGAAGATGTTTCTGCTGATTCCTTAAAGTCGATCGTCTTTACTCCAAAAAAGAAGTCTGGTGAAGGTTTAATGACAAAAGGCAAGGTGGATGGAAATGAAGAAAACATGCATAAGAAATTTGTTTCCGTTAGTATTGAGGATAGTGAGGTTTGCATGATGGATGAAGATGAGCCTGTAATCAATAAAGGTAGCAGCTTGCAGAAAGGTGCTCGCAGATATCGAACAAAGCCCAGTATTGATGAATGA 999 40.74 MEDSFKVRIDKTFGTLSPQQQSSLWSLTDEEIQHSKWIQPKPKPQNDDLLKTPKKPFSPFLQSLIDQPSSSADLQADIQELDTDEDDDSDDDDGDKRDKGEMGFVKPDDHNNEEWDIRASVGLDCTLDNEEEEDCFDKVAVGKEESAERFYMKDVNDYEVEMDSNIALPGSLTDVIKDPRANHKAAKLRIKEDYESAKKLGACNVPDHVLNPSRYTHYTFDSDEEVDEESNQKACMDFLNTLKGSAAMEIQEDVSADSLKSIVFTPKKKSGEGLMTKGKVDGNEENMHKKFVSVSIEDSEVCMMDEDEPVINKGSSLQKGARRYRTKPSIDE 332
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind9g03635 332 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 197 253 IPR029338 -
Cind9g03635 332 MobiDBLite consensus disorder prediction 307 332 - -
Cind9g03635 332 MobiDBLite consensus disorder prediction 95 115 - -
Cind9g03635 332 MobiDBLite consensus disorder prediction 13 33 - -
Cind9g03635 332 MobiDBLite consensus disorder prediction 78 94 - -
Cind9g03635 332 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 200 IPR029338 -
Cind9g03635 332 MobiDBLite consensus disorder prediction 62 77 - -
Cind9g03635 332 MobiDBLite consensus disorder prediction 1 115 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind9g03635 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr1:471867537 Cind9g03635 Cind-Chr9:154311564 dispersed