AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind9g03640 ATGGGTGCATCTGAGTCTATGGAAGCAATAGAAGACGAGGAACACGACGGGTATAAGGAAGATATAGATGATCAAGGTGATTATGAAACAATAAAGTTATTGAGAAAAGATATGACAAATATTCTTGAACATGACCTTGAAATGACACCTTCTATATCGTCTTTGTCACCTCAATTATCATCTTTCGACACCCCACACATTGATCAAGCCATAAAGGATTTAAACGGCCCTTATGGCACGTCCAACATGACACGTAACTTCTCATTGGAATCATTAAATGATGATCGAACGAGTGAGATATATGTGATATGTCATGGTGAATGTCATATGAAACTAAAGCCTGATTTGGTTAGTGGTAGGTGTCCTGAAGCTTCATTAACGCCAAATGGAAAAAGGCAATCAAGGGCATTGGCAGTTTTCTTGAAATCACAAGGGATTCGGTTTAATGCCATCTACACATCACCTTTAGACCGGGCTAGAGCAACCGCGGTTCCTGTTTGTCAGGAGATGAGTTTTCCAGAGCACATGATACAAACCTCGGATGCACTACAAGATATGAGTCAAGGAACTTGGGAGGGTTGCCATCACTCGGATGTATATAGCCCTTCAGTTGTAAGCATAATGGAGAGACTACAACCTGATTTTTGTGCACCCTCTGGAGAAACTCTAAGACAGGTGGAATTTCGAATGATGGAGTTTCTAAATGCAACAGTAACATGTTTGCCCGAAAACTTGAAATGTGATTCCCCCCCTTTAGATTCTGTTCCTCCACTACCCAAATTGGATTTATCAACAAGGCCTAGACTAGGAGCCCCCAAGAAAAAGTCAAGCAAGAGCCGACTACAAATGGTGCACACAAGTGCAGATCATGAGGCTGATGACGAGATGACCCCTCGAGCGCCTAGCAAGCATCGTGAACCTAAAGTGTTTCCTGAACCAATCATGGAAAAAATTAGCAACAACAATAATAATCATGCCAACAATAACAACTCCCATCTTTCAACTGATTTGTCATGTTGTATAGGCATGTTTAGTCATTCGATACCTATCAAATGTCTAGTGACGGGTATCCTTGGTTGTAGTCCGACTATGACCAACAAGATATGCATAGAAGATTCGTCGATAACAGTATTGCAATATTCCCAGAAAATGGGTTGGCAAATCAAAAGAGTGAACGATACTTGTCATCTGAGGCTTATGTAG 1203 41.23 MGASESMEAIEDEEHDGYKEDIDDQGDYETIKLLRKDMTNILEHDLEMTPSISSLSPQLSSFDTPHIDQAIKDLNGPYGTSNMTRNFSLESLNDDRTSEIYVICHGECHMKLKPDLVSGRCPEASLTPNGKRQSRALAVFLKSQGIRFNAIYTSPLDRARATAVPVCQEMSFPEHMIQTSDALQDMSQGTWEGCHHSDVYSPSVVSIMERLQPDFCAPSGETLRQVEFRMMEFLNATVTCLPENLKCDSPPLDSVPPLPKLDLSTRPRLGAPKKKSSKSRLQMVHTSADHEADDEMTPRAPSKHREPKVFPEPIMEKISNNNNNHANNNNSHLSTDLSCCIGMFSHSIPIKCLVTGILGCSPTMTNKICIEDSSITVLQYSQKMGWQIKRVNDTCHLRLM 400
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind9g03640 400 Gene3D - 289 399 IPR029033 -
Cind9g03640 400 Gene3D - 93 246 IPR029033 -
Cind9g03640 400 MobiDBLite consensus disorder prediction 1 22 - -
Cind9g03640 400 SMART PGAM-5 99 353 IPR013078 -
Cind9g03640 400 PANTHER PUTATIVE-RELATED 1 248 - -
Cind9g03640 400 SUPERFAMILY Phosphoglycerate mutase-like 99 398 IPR029033 -
Cind9g03640 400 Pfam Histidine phosphatase superfamily (branch 1) 100 238 IPR013078 -
Cind9g03640 400 MobiDBLite consensus disorder prediction 284 307 - -
Cind9g03640 400 MobiDBLite consensus disorder prediction 249 307 - -
Cind9g03640 400 CDD HP-PGM-like 99 184 IPR013078 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind9g03640 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
68471 Cind7g04763 Cind9g03640
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr7:83984856 Cind9g03640 Cind-Chr9:154228235 wgd