AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind9g03650 ATGAACCCATATCAACCACCAAAATATCCTTCAGCCTCATCATCGTCTGATCAGGCTGGTAATTATTGGGGTACACACGCCGCGATGGGTACCCCTATGCCTGCGCCTAATCCTTACGTCCAATATGGCGCTCCTCAGGCCCCACCACCTCCTCCTCCTATGCCAAATAACATGGATAATGTACGTAAGAAACTTAACTCATGGGGTAATAAAGCCGAAACAACTGCATCTAATATTTGGACCAATTTGAAATCTGGTCAATCTGTGACTGGATCAGCATGGGGAAAAATGAATTTGACTGCAAAAGCGTTAACGGAAGGTGGGTTTGAATCATTGTACAAGCAGAACTTCACGACTTACCCAAACGAGAAGCTCAACAAGACTTTTGCATGTTATATGTCGACGTCTACTGGACCTGTTGCAGGAACGTTGTATTTGTCTAATATTCATGTTGCGTTTTGTAGCGATCGGCCTTTGGCTTTTAAACAACCCAACGGCATGGAGTCTTGGATCTACTACAAGGTTATAATCCCATTGGAGAAGATAGCCACAGTAAACCCTGTTACAATACCAGGTAAAAAACAAATAGACAAGTACATCCAACTCTCTACAATTGACGGTCAAGACTTCTGGTTCATGGGTTTCGTGAATCATGAGAAAGCATCAAAACATCTTCTCAATGGGGTGGCCACTTGTGTTAAAACCATTCCGGTTATTCCTTGA 723 43.15 MNPYQPPKYPSASSSSDQAGNYWGTHAAMGTPMPAPNPYVQYGAPQAPPPPPPMPNNMDNVRKKLNSWGNKAETTASNIWTNLKSGQSVTGSAWGKMNLTAKALTEGGFESLYKQNFTTYPNEKLNKTFACYMSTSTGPVAGTLYLSNIHVAFCSDRPLAFKQPNGMESWIYYKVIIPLEKIATVNPVTIPGKKQIDKYIQLSTIDGQDFWFMGFVNHEKASKHLLNGVATCVKTIPVIP 240
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind9g03650 240 Pfam GRAM domain 114 224 IPR004182 -
Cind9g03650 240 PANTHER GEM-LIKE PROTEIN 2 27 227 IPR037848 -
Cind9g03650 240 SMART gram2001c 111 189 IPR004182 -
Cind9g03650 240 Gene3D - 109 230 IPR011993 -
Cind9g03650 240 MobiDBLite consensus disorder prediction 1 30 - -
Cind9g03650 240 MobiDBLite consensus disorder prediction 7 22 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind9g03650 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr9:154071713 Cind9g01356 Cind-Chr9:218339612 wgd