AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind9g03653 ATGGCGAAGCTAACGATGAACTCAATTCTCTCTGTCCTAACTCTCATGATCGTGATCTCATCGTCAGCAATCGCATCATCCGATTCACCCTTCATCGTAGCTCACAAGAAAGCGACACTTAACAGACTCAAATCTGGATTTGAAAAAGTCTCGGTTTCTATCGATATTTATAACCAAGGATCTGCGACCGCATATGATGTTAGTCTTACTGATGATGATTGGACTCCTGAGACATTCAACCTCATCTCTGGAAACACATCAACCTCTTGGGAAAGACTTGATGTTGGTGCTGTTCTATCACACACCTTTGAGTTGGAGTCAAATAAGAAAACCGTCTTTCACAGCAAACCAGCTGTTGTTACATTCCGTGTCCCCACAAAGGCTGCATTACAGGAGGCATATTCAACCCCACTTTTGCCACTAGAAATCCTATCAGACAAGCCTCGTGAGAGTACTCTTGGTCTCAAGTTGTTGGCTAAGTATGGCTCTTTGGTGTCTGTCATCTCCATTGTGGTTTTGTTTGTGTACTTGGTGGCTACTCCATCAAAGTCTGGTGCTGCAAAGGGAAGCAAGAAGAAACGTTAA 585 43.59 MAKLTMNSILSVLTLMIVISSSAIASSDSPFIVAHKKATLNRLKSGFEKVSVSIDIYNQGSATAYDVSLTDDDWTPETFNLISGNTSTSWERLDVGAVLSHTFELESNKKTVFHSKPAVVTFRVPTKAALQEAYSTPLLPLEILSDKPRESTLGLKLLAKYGSLVSVISIVVLFVYLVATPSKSGAAKGSKKKR 194
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind9g03653 194 PANTHER TRANSLOCON-ASSOCIATED PROTEIN, BETA SUBUNIT PRECURSOR TRAP-BETA SIGNAL SEQUENCE RECEPTOR BETA SUBUNIT 1 193 - GO:0005783(PANTHER)
Cind9g03653 194 Pfam Translocon-associated protein beta (TRAPB) 17 190 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind9g03653 K13250 translocon-associated protein subunit beta
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr9:153935266 Cind9g03651 Cind-Chr9:154068055 proximal