AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind9g03656 ATGATGAAGTCATCATTTGGTAAATTAGGTCGAAAGCTATCGATGCAAAGAAGTGATGTGAAGGAGATTCATCATCATCAGCAGCAGCACCAGCCTTCTGTTTATATTGATCAGCTTAATCAAGCTTCTAAGGATATGCAAGATATGAGGAACTGTTATGACGGTTTGTTGTCTGCGGCTGCTGCAACGGCTAATAGTATATATGAATTTTCGGAGTCTCTAAATGAAATGGGGAGCTGTTTGCTGGAGAAAACGGTTGCGGACGCTGATGCTGAAAGTGGAAAAGTGCTATCGACCTTAGGTAATATGCAATTGGAACTTCAGAAAATCGCCGATGCTTATCGTTCTTATGTAATTGTGACTATCACCAACCCATCAGAGTCTCTCCTTAGTGAGCTACGCAAAGTGGAGGAGATGAAACTTCAGTGTGATGAAAAAAGAGAGGTGTATGAATACATGATGACACAACACAGAGAAAAGGGAAAATTAAGAAATGGAAAAGTTGAAAGTTCGATTGCACAAAAGCTACTCGAAGCTCAGGATGAATATGATGAAGTGACTAGACTATGTGTATTCCGCGTAAAATCGCTGAAGGAAGGTCAATGCCGCAGTCTGTTAACACAAGCTGCTCGCCATCATGCTGCACAGTTGAATTTCTTTCGCAAGGGACTTAAAACTCTTGAAGCAGTTGAACCTTTTATAAGAAATGTTGCAGAAAAGCATCGCATTGATTACCAACTCGCTGGGTTACCTAATCGAGAATCTGTGGAAGGTGAACCTATGAGTGGCTATGAAAGCACCGATGATGGAGAACTGAGTTTTGATTATAAACAAAAGAAACATGGGCTTGATGATGACGGCACCTCGCCAAATCAAATGGAGCTTGACCAGGTAGAACTTCCATACCTTCAACCTTCAAACTTAGAAGATTCAGAGATAAATTTAAATAAACATAGAGGGGAACAAGTTTTTGGCAGGCAAGCTAGAGTGAGCAGCTATTCTGCCCCTTTATTTCCAGACAAGATTGATGCATCTGAAAAACCAAAAGAAACACAACCCCCACGAAAATTTCACTCTCATGTACTACCCCCTCCTGTTGTGGATACCCGGAATCCAGTTTTAAGACCCTCTCCATCAGTATCCCAGTCCACTCCATCTCAAAATGATCAACAGAAGCATCTGAGACGTATTAGTGCTGACAACACATCAACATCTGCTGCTTTGGCCTCAAAGGTCCAGTCAACAATAAAAGATGGTAATAGTATCAATTCCTCCACCCAGTTACCCACACCTTCTGCTGGGAGATTTTCATTCTCACAATGGGATAATTTTGGTGGAAACGATAGTAAAGCAGCCAAAAGACAATCCTACTCTGGTCCATTACCACCAAGCAAACAATTTTCTTTTAAGATGGCATCTAATAATAGTGGGCCCATTGCCTCTACTGGGCTTCCTCAACCGCCTTCTCGGGCCCCGGTTTCTCAGCCAAATTTGTTATCAAATGTCTCTCGTAGTGCTTCACCACCCCCTATATCTTCACCTAAAATAAGTGAGCTTCATGAGCTTCCTAGGCCCCCTAGTGCCTTCTCGAAACCTGTTGTTATATCTGGTGGTTTAGTAGGACATTCAGCACCGTTATATATCAAGAATCAAGAAATTTCTCCACCAAATAAAAAGGCTATGCTAACATCAACTTGTGCATCTCCTCTTCCTCTTCCCCCTTCAGTACCTAAAAGCCTTTCCTTGCGCTCAAGTAACAACGAGACCTGA 1770 42.15 MMKSSFGKLGRKLSMQRSDVKEIHHHQQQHQPSVYIDQLNQASKDMQDMRNCYDGLLSAAAATANSIYEFSESLNEMGSCLLEKTVADADAESGKVLSTLGNMQLELQKIADAYRSYVIVTITNPSESLLSELRKVEEMKLQCDEKREVYEYMMTQHREKGKLRNGKVESSIAQKLLEAQDEYDEVTRLCVFRVKSLKEGQCRSLLTQAARHHAAQLNFFRKGLKTLEAVEPFIRNVAEKHRIDYQLAGLPNRESVEGEPMSGYESTDDGELSFDYKQKKHGLDDDGTSPNQMELDQVELPYLQPSNLEDSEINLNKHRGEQVFGRQARVSSYSAPLFPDKIDASEKPKETQPPRKFHSHVLPPPVVDTRNPVLRPSPSVSQSTPSQNDQQKHLRRISADNTSTSAALASKVQSTIKDGNSINSSTQLPTPSAGRFSFSQWDNFGGNDSKAAKRQSYSGPLPPSKQFSFKMASNNSGPIASTGLPQPPSRAPVSQPNLLSNVSRSASPPPISSPKISELHELPRPPSAFSKPVVISGGLVGHSAPLYIKNQEISPPNKKAMLTSTCASPLPLPPSVPKSLSLRSSNNET 589
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind9g03656 589 MobiDBLite consensus disorder prediction 374 483 - -
Cind9g03656 589 MobiDBLite consensus disorder prediction 564 589 - -
Cind9g03656 589 CDD BAR 45 232 - -
Cind9g03656 589 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 2 587 IPR037488 -
Cind9g03656 589 MobiDBLite consensus disorder prediction 493 512 - -
Cind9g03656 589 MobiDBLite consensus disorder prediction 335 523 - -
Cind9g03656 589 MobiDBLite consensus disorder prediction 342 356 - -
Cind9g03656 589 SUPERFAMILY BAR-IMD domain-like 38 235 IPR027267 -
Cind9g03656 589 Gene3D Arfaptin homology (AH) domain-BAR domain 29 245 IPR027267 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind9g03656 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
68474 Cind7g04775 Cind9g03656
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cind Cind-Chr1:471805968 Cind9g03656 Cind-Chr9:153761006 dispersed
Cind Cind-Chr7:129443253 Cind9g03656 Cind-Chr9:153761006 transposed
Cind Cind-Chr7:83641405 Cind9g03656 Cind-Chr9:153761006 wgd
Cind Cind-Chr9:153761006 Cind9g01350 Cind-Chr9:218479144 wgd