Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind9g03656 | ATGATGAAGTCATCATTTGGTAAATTAGGTCGAAAGCTATCGATGCAAAGAAGTGATGTGAAGGAGATTCATCATCATCAGCAGCAGCACCAGCCTTCTGTTTATATTGATCAGCTTAATCAAGCTTCTAAGGATATGCAAGATATGAGGAACTGTTATGACGGTTTGTTGTCTGCGGCTGCTGCAACGGCTAATAGTATATATGAATTTTCGGAGTCTCTAAATGAAATGGGGAGCTGTTTGCTGGAGAAAACGGTTGCGGACGCTGATGCTGAAAGTGGAAAAGTGCTATCGACCTTAGGTAATATGCAATTGGAACTTCAGAAAATCGCCGATGCTTATCGTTCTTATGTAATTGTGACTATCACCAACCCATCAGAGTCTCTCCTTAGTGAGCTACGCAAAGTGGAGGAGATGAAACTTCAGTGTGATGAAAAAAGAGAGGTGTATGAATACATGATGACACAACACAGAGAAAAGGGAAAATTAAGAAATGGAAAAGTTGAAAGTTCGATTGCACAAAAGCTACTCGAAGCTCAGGATGAATATGATGAAGTGACTAGACTATGTGTATTCCGCGTAAAATCGCTGAAGGAAGGTCAATGCCGCAGTCTGTTAACACAAGCTGCTCGCCATCATGCTGCACAGTTGAATTTCTTTCGCAAGGGACTTAAAACTCTTGAAGCAGTTGAACCTTTTATAAGAAATGTTGCAGAAAAGCATCGCATTGATTACCAACTCGCTGGGTTACCTAATCGAGAATCTGTGGAAGGTGAACCTATGAGTGGCTATGAAAGCACCGATGATGGAGAACTGAGTTTTGATTATAAACAAAAGAAACATGGGCTTGATGATGACGGCACCTCGCCAAATCAAATGGAGCTTGACCAGGTAGAACTTCCATACCTTCAACCTTCAAACTTAGAAGATTCAGAGATAAATTTAAATAAACATAGAGGGGAACAAGTTTTTGGCAGGCAAGCTAGAGTGAGCAGCTATTCTGCCCCTTTATTTCCAGACAAGATTGATGCATCTGAAAAACCAAAAGAAACACAACCCCCACGAAAATTTCACTCTCATGTACTACCCCCTCCTGTTGTGGATACCCGGAATCCAGTTTTAAGACCCTCTCCATCAGTATCCCAGTCCACTCCATCTCAAAATGATCAACAGAAGCATCTGAGACGTATTAGTGCTGACAACACATCAACATCTGCTGCTTTGGCCTCAAAGGTCCAGTCAACAATAAAAGATGGTAATAGTATCAATTCCTCCACCCAGTTACCCACACCTTCTGCTGGGAGATTTTCATTCTCACAATGGGATAATTTTGGTGGAAACGATAGTAAAGCAGCCAAAAGACAATCCTACTCTGGTCCATTACCACCAAGCAAACAATTTTCTTTTAAGATGGCATCTAATAATAGTGGGCCCATTGCCTCTACTGGGCTTCCTCAACCGCCTTCTCGGGCCCCGGTTTCTCAGCCAAATTTGTTATCAAATGTCTCTCGTAGTGCTTCACCACCCCCTATATCTTCACCTAAAATAAGTGAGCTTCATGAGCTTCCTAGGCCCCCTAGTGCCTTCTCGAAACCTGTTGTTATATCTGGTGGTTTAGTAGGACATTCAGCACCGTTATATATCAAGAATCAAGAAATTTCTCCACCAAATAAAAAGGCTATGCTAACATCAACTTGTGCATCTCCTCTTCCTCTTCCCCCTTCAGTACCTAAAAGCCTTTCCTTGCGCTCAAGTAACAACGAGACCTGA | 1770 | 42.15 | MMKSSFGKLGRKLSMQRSDVKEIHHHQQQHQPSVYIDQLNQASKDMQDMRNCYDGLLSAAAATANSIYEFSESLNEMGSCLLEKTVADADAESGKVLSTLGNMQLELQKIADAYRSYVIVTITNPSESLLSELRKVEEMKLQCDEKREVYEYMMTQHREKGKLRNGKVESSIAQKLLEAQDEYDEVTRLCVFRVKSLKEGQCRSLLTQAARHHAAQLNFFRKGLKTLEAVEPFIRNVAEKHRIDYQLAGLPNRESVEGEPMSGYESTDDGELSFDYKQKKHGLDDDGTSPNQMELDQVELPYLQPSNLEDSEINLNKHRGEQVFGRQARVSSYSAPLFPDKIDASEKPKETQPPRKFHSHVLPPPVVDTRNPVLRPSPSVSQSTPSQNDQQKHLRRISADNTSTSAALASKVQSTIKDGNSINSSTQLPTPSAGRFSFSQWDNFGGNDSKAAKRQSYSGPLPPSKQFSFKMASNNSGPIASTGLPQPPSRAPVSQPNLLSNVSRSASPPPISSPKISELHELPRPPSAFSKPVVISGGLVGHSAPLYIKNQEISPPNKKAMLTSTCASPLPLPPSVPKSLSLRSSNNET | 589 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind9g03656 | 589 | MobiDBLite | consensus disorder prediction | 374 | 483 | - | - | |
| Cind9g03656 | 589 | MobiDBLite | consensus disorder prediction | 564 | 589 | - | - | |
| Cind9g03656 | 589 | CDD | BAR | 45 | 232 | - | - | |
| Cind9g03656 | 589 | PANTHER | HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE | 2 | 587 | IPR037488 | - | |
| Cind9g03656 | 589 | MobiDBLite | consensus disorder prediction | 493 | 512 | - | - | |
| Cind9g03656 | 589 | MobiDBLite | consensus disorder prediction | 335 | 523 | - | - | |
| Cind9g03656 | 589 | MobiDBLite | consensus disorder prediction | 342 | 356 | - | - | |
| Cind9g03656 | 589 | SUPERFAMILY | BAR-IMD domain-like | 38 | 235 | IPR027267 | - | |
| Cind9g03656 | 589 | Gene3D | Arfaptin homology (AH) domain-BAR domain | 29 | 245 | IPR027267 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind9g03656 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 68474 | Cind7g04775 | Cind9g03656 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr1:471805968 | Cind9g03656 | Cind-Chr9:153761006 | dispersed | |
| Cind | Cind-Chr7:129443253 | Cind9g03656 | Cind-Chr9:153761006 | transposed | |
| Cind | Cind-Chr7:83641405 | Cind9g03656 | Cind-Chr9:153761006 | wgd | |
| Cind | Cind-Chr9:153761006 | Cind9g01350 | Cind-Chr9:218479144 | wgd |