AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cind9g04297 ATGGCAGTTGTTGGTTCTTTCAACCTGCTGACTGTTAAATCTTCACCACTATGTTTCGGGTATCATATATCAAGTTGCAACAAGCCTTTATTTAGTAGTACTAATAAGTTTGGATCATTTAAGAAAAATCGTATTCAGATATCTGTTTGTAAATCATCAGCAACTTCTTCTACTTCTGCTTCTTTCTTGTCGTTTCGTGATCTTGATGCTGATGACTTTAGACATCCTCTTGACAAGCAGAATACGCTGCTTTTGCGGGCAATTCCGGGCCTAAACGAGATTGGCAAGGCTTTGTTAGGGAGCATAGCAGAGCAGGTGATGGTACTTGAAAATATAGGAACCTCCGTTCTAGTATCCGAAAATCAGCTTTCAGAACTTCATCAGTTAATGGTTCAGTCAGCAGAAGCACTGAAAATTGAAGCTCCTGACCTGTATGTGCGCCAAAGTCCAGTACCTAATGCATATACTTTAGCCATTAATGGTAAAAAGCCATTTGTTGTTGTTCATACAAGCCTTATAGAGCTTCTTACAAGAAAGGAGTTGCAGGCTGTTTTGGCTCATGAGTTAGGACACCTTAAATGTGATCATGGTGTATGGCTGACAGTAGCAAATATACTGACCGTTGGAGCATACACTATACCTGGGATTGGAGGCATGATAGCCCAGAACTTAGAAGAACAACTATTCCGTTGGCTCCGAGCTGCAGAGCTTACCTGTGATCGGGCTGCCCTTCTTGTAGTTCAAGATCCCAAGGTGGTCATATCTGTTCTGATGAAACTTGCTGGAGGAAGCCCTTCTTTGGCCGATCAACTAAATGTGGATGCTTTTCTTGAACAAGCCCGATCTTATGATAGAGCATCTGCAAGTCCAGTTGGATGGTATATAAGAAATGCACAAACGAGACAACTTTCCCATCCTCTTCCTAAGTTTAGCAAATTTGTGAAATATCAAATACCGTCAAATACTTATAAGTTTGTTAAGCCGTGGATGCTTGTCACTCTGGTGTTGTTTGGATAA 1017 41.2 MAVVGSFNLLTVKSSPLCFGYHISSCNKPLFSSTNKFGSFKKNRIQISVCKSSATSSTSASFLSFRDLDADDFRHPLDKQNTLLLRAIPGLNEIGKALLGSIAEQVMVLENIGTSVLVSENQLSELHQLMVQSAEALKIEAPDLYVRQSPVPNAYTLAINGKKPFVVVHTSLIELLTRKELQAVLAHELGHLKCDHGVWLTVANILTVGAYTIPGIGGMIAQNLEEQLFRWLRAAELTCDRAALLVVQDPKVVISVLMKLAGGSPSLADQLNVDAFLEQARSYDRASASPVGWYIRNAQTRQLSHPLPKFSKFVKYQIPSNTYKFVKPWMLVTLVLFG 338
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cind9g04297 338 Gene3D Metalloproteases (zincins), catalytic domain 116 204 - -
Cind9g04297 338 Pfam Peptidase family M48 124 281 IPR001915 GO:0004222(InterPro)|GO:0006508(InterPro)
Cind9g04297 338 CDD M48-Ste24p-like 112 308 - -
Cind9g04297 338 PANTHER CAAX PRENYL PROTEASE 1 58 307 - GO:0004222(PANTHER)|GO:0030176(PANTHER)|GO:0071586(PANTHER)
Cind9g04297 338 FunFam Peptidase M48 family protein 116 204 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cind9g04297 - -