Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cind9g04299 | ATGCCATCATTAATCCTAGAAGAACCACTTTTAACGCCAACCCAAGACAGATTCTGCATGTTCCCAATTCACTACCCTCAAATATGGGAAATGTACAAAAAAGCCCAAGCTTCATTCTGGACAGCAGAAGAAGTGGACTTATCAGCAGATATCCGTCACTGGGAGTCGTTAACTAACGGAGAACGTCATTTCATTACACACGTTCTCGCGTTTTTCGCGTCTTCTGATGGCATTGTGTTGGAGAATTTGGCTAGTAGGTTTATGAATGATGTCCAAGTAGCCGAAGCGAGGGCTTTTTACGGGTTTCAAATTGCGATAGAGAATATACATTCAGAGATGTATAGTTTGCTTTTGGAAACGTATGTTAAGGATGGGAAGGAGAAAGATAGGTTGTTTCGGGCAGTTGAGACAATTCCGTGTGTTGAGAAAAAGGCGAAGTGGGCGATGAAGTGGATTGATGGCTCGGAGTCGTTTGCTGAAAGGATTATTGCGTTTGCGTGTGTTGAAGGTATATTCTTTTCAGGAAGCTTTTGCGCGATATTTTGGTTAAAAAAGCGTGGCTTAATGTCAGGACTAACCTTCTCAAACGAGTTAATCTCACGAGACGAAGGCCTCCACTGCGATTTCGCATGCCTGCTCTACACTTTGCTAAACAACAAACTAACCGAAGAACGCGTAAAGTCCATAGTATCTGACGCAGTTGATATCGAACGTGAATTTGTATGTGACGCATTACCATGTGCACTAGTTGGCATGAATGGTGAACTCATGAGTACATATATCGAGTTTGTGGCTGATAGGTTGTTGGTGTCCTTAGGATTTAGCAAAATGTACAATGTTTCGAACCCGTTTGATTGGATGGAATTGATTTCGTTACAAGGGAAGACGAATTTTTTCGAGAAGCGAGTAGGGGAGTATCAAAAGGCTTCGATTATGTCGAATTTGAATGCAAATGGTGGTGATCAACATGTGTTCAAGATGGATGAAGATTTTTAA | 996 | 41.77 | MPSLILEEPLLTPTQDRFCMFPIHYPQIWEMYKKAQASFWTAEEVDLSADIRHWESLTNGERHFITHVLAFFASSDGIVLENLASRFMNDVQVAEARAFYGFQIAIENIHSEMYSLLLETYVKDGKEKDRLFRAVETIPCVEKKAKWAMKWIDGSESFAERIIAFACVEGIFFSGSFCAIFWLKKRGLMSGLTFSNELISRDEGLHCDFACLLYTLLNNKLTEERVKSIVSDAVDIEREFVCDALPCALVGMNGELMSTYIEFVADRLLVSLGFSKMYNVSNPFDWMELISLQGKTNFFEKRVGEYQKASIMSNLNANGGDQHVFKMDEDF | 331 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cind9g04299 | 331 | PANTHER | RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN | 8 | 331 | IPR000358 | GO:0009263(InterPro) | |
| Cind9g04299 | 331 | PIRSF | NrdB | 7 | 317 | IPR000358 | GO:0009263(InterPro) | |
| Cind9g04299 | 331 | CDD | RNRR2 | 18 | 292 | IPR033909 | GO:0009263(InterPro) | |
| Cind9g04299 | 331 | Gene3D | Ribonucleotide Reductase, subunit A | 3 | 308 | IPR012348 | GO:0016491(InterPro) | |
| Cind9g04299 | 331 | SUPERFAMILY | Ferritin-like | 5 | 308 | IPR009078 | - | |
| Cind9g04299 | 331 | Pfam | Ribonucleotide reductase, small chain | 17 | 283 | IPR000358 | GO:0009263(InterPro) | |
| Cind9g04299 | 331 | ProSitePatterns | Ribonucleotide reductase small subunit signature. | 106 | 122 | IPR030475 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cind9g04299 | K10808 | ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1] | ||||
| Cind9g04299 | K00526 | ribonucleoside-diphosphate reductase beta chain [EC:1.17.4.1] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cind | Cind-Chr8:281235199 | Cind9g04299 | Cind-Chr9:150557894 | dispersed | |
| Cind | Cind-Chr8:281031429 | Cind9g04299 | Cind-Chr9:150557894 | dispersed | |
| Cind | Cind-Chr7:82161353 | Cind9g04299 | Cind-Chr9:150557894 | wgd |