AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g00622 ATGTATGTAGTGGACAGCAGAGGAGGTGCAATAGCATGCATGCTGCTTGCACTCCTCTTCCTCGGAACATGGCCCGCCATTTTAACGTTGTTGGAACGACGAGGCAGGCTTCCGCAACACACTTACCTTGATTACACAATCACTAATCTTTTGGCTGCTGTTATAATTGCATTCACATTTGGGGAGTTTGGTCATACAAATGATGGTAAACCCAATTTTCTAGTCCAGCTTTCACAGAATAATTGGCCAAGTGTTCTGTTTGCAATGGGGGGTGGGGTGGTTTTGAGTCTGGGAAACCTGTCAACACAATATGCATGGGCATTTGTCGGTTTATCGGTAACCGAAGTGATCACTTCAAGTATTACTGTTGTCATAGGTACAACTTTGAACTACTTTTTAGATGACAAGATCAACAGAGCCGAGATTCTATTCCCAGGGGTCGCGTGTTTCTTGATTGCAGTTTGTCTTGGTTCGTTTGTGCACGCGTCTAATGCCAAAGATAATGAAGTGAAGCTTGAAAGAGCAGGCGCGGGTGAAAAAAGCTTAATTAGTAATGGAGCAGCAGCAAACTCGAATCCAAAAAAAGATTTGGAGAATGGAAGCAGTAAAGTGGAGAAAGCCAAAGCAGGGACTGCAAATTTTCTTATCGAGCTCGAAGGCCGTAGAGCAATCAAGGTGTTCGGGAAAAGCACATTGATTGGTTTGGGCATATGTTTGTTCGCGGGAGTTTGTTTCTCTCTTTTCTCGCCGGCTTTTAACCTTGCAACGAATGACCAATGGCATACATTGGACGATGGCGTCCCTCATTTAAGTGTCTACACAGCTTTTTTCTACTTCTCTTGCTCGTGTTTCGTCATCGCCATAATCTTAAACATTACACTCCTCTACCGCCCCGCCTTCAACTTGCCTCGCTCATCAATCCACGCTTACTTAAACGACTGGGACGGTCGAGCGTGGGCGTTTCTGGCTGGCTTTTTGTGTGGGTTCGGGAACGGTCTCCAGTTTATGGGAGGCCAGGCTGCTGGTTATGCTGCAGCTGATGCAGTTCAGGCACTTCCACTTGTAAGTACCTTTTGGGGTGTGCTCTTTTTCGGTGAATACCGCAAATCGTCGAGAAGAACATACGTGCTACTCGCAGGCATGTTATCCATGTTTATTGTGGCTGTTGGAGTTCTAATGGCGTCGTCCGGACACCGAAAACATTAA 1206 46.02 MYVVDSRGGAIACMLLALLFLGTWPAILTLLERRGRLPQHTYLDYTITNLLAAVIIAFTFGEFGHTNDGKPNFLVQLSQNNWPSVLFAMGGGVVLSLGNLSTQYAWAFVGLSVTEVITSSITVVIGTTLNYFLDDKINRAEILFPGVACFLIAVCLGSFVHASNAKDNEVKLERAGAGEKSLISNGAAANSNPKKDLENGSSKVEKAKAGTANFLIELEGRRAIKVFGKSTLIGLGICLFAGVCFSLFSPAFNLATNDQWHTLDDGVPHLSVYTAFFYFSCSCFVIAIILNITLLYRPAFNLPRSSIHAYLNDWDGRAWAFLAGFLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVLFFGEYRKSSRRTYVLLAGMLSMFIVAVGVLMASSGHRKH 401
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g00622 401 Pfam Ureide permease 41 395 IPR009834 GO:0016020(InterPro)|GO:0071705(InterPro)
Cobi2g00622 401 PANTHER UREIDE PERMEASE 1-RELATED-RELATED 1 400 IPR030189 GO:0005274(PANTHER)|GO:0015505(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0022857(InterPro)|GO:0071705(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g00622 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:7704974 Cobi2g00622 Cobi-Chr2:7711769 tandem