AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02017 ATGGGGAGTCAGTCGATCGCTTTCAGAGTGATGCGACTATGCCGGCCGACGTTCCACGTGGAAACCCCTCTCCGATTCGACCTCTCGGATGTGATAGTCGGCGAGGATCAACAACTCCCGGGCCTCCTTGAATCTGAAGCTACGGACCTCACCTACACTAACCGCTTCCTTCTCCGTCATGATGTTGATGATGCCATGGGCCTTCCCGGTATGCTTGTCCTTCCTCAGTCATTCGGTGCCATATACCTTGGAGAAACCTTCTGCAGCTACATCAGCATCAACAACAGCTCCACTTTTGAAGTCAGAGACATTATCATTAAGGCAGAGATACAAACCGAACGACAGCGAATACTGCTCTTAGATACAACTAAAACCCCTGTTGAAACAATACGAGCAGGAGGACGATATGATTTCATTGTTGAACATGATGTTAAGGAGCTCGGTGCACACACTCTCGTCTGTACTGCTCAATATAGTGACGCCGCTGATGCTGACCGCAAATATCTTCCACAATATTTCAAGTTTATGGTTTCAAATCCACTTTCTGTCAGGACAAAGGTCCGCGTTGTGAAGGAAACTACATACTTGGAAGCTTGTTTAGAAAACAATACAAAATCAAATCTTTATATGGACCAAGTGGATTTTGAGCCTACTTCAAACTGGAGTGCGATATTACTAAAACCCGACAATCATCATTCAGAGAAGACTGATTCTACAAGAGAGATATTCAAGCCACCCATTTTGATTAAATCTGGAGGTGGAATTCATAACTATCTTTACCGGTTAAAATCATTATTGGATGGATCTGGACCTTTGAAATTTGAGGGGAGTAATGTTCTTGGCAAACTTCAGATAACATGGCGTACCAATTTGGGTGAACCGGGCCGGTTGCAAACACAGCAGATTCTTGGTAATATCGTTGCACAAAGAGAGATTGAACTGAAAGCGACGAAGGTGCCAGCTGTCATCATCTTAGAAAAACCCTTTACTGTATACTTGAATCTCACAAACCTGACCGAGAACAAAGTTGGCCCGTTTGAAGTTTTCTTATCTTCAAGTGCTAACCAAGAGGAAAAGACTCTTGTTGGTATCGGGCTTAAAAAGATGGTTTTACCTGAGGTGGAAGCATTCAAGTCTCTGGATTTCCAATTGAATTTAATTCCAATGGAAGCTGGAATGCAGAAAATCAGTGGCATTACAGTGTTTAATACAACCGAGAAGATAACTTATGACCCATTGCCGGATATCGAGATTTTTGTTGATTCATATTGA 1272 42.92 MGSQSIAFRVMRLCRPTFHVETPLRFDLSDVIVGEDQQLPGLLESEATDLTYTNRFLLRHDVDDAMGLPGMLVLPQSFGAIYLGETFCSYISINNSSTFEVRDIIIKAEIQTERQRILLLDTTKTPVETIRAGGRYDFIVEHDVKELGAHTLVCTAQYSDAADADRKYLPQYFKFMVSNPLSVRTKVRVVKETTYLEACLENNTKSNLYMDQVDFEPTSNWSAILLKPDNHHSEKTDSTREIFKPPILIKSGGGIHNYLYRLKSLLDGSGPLKFEGSNVLGKLQITWRTNLGEPGRLQTQQILGNIVAQREIELKATKVPAVIILEKPFTVYLNLTNLTENKVGPFEVFLSSSANQEEKTLVGIGLKKMVLPEVEAFKSLDFQLNLIPMEAGMQKISGITVFNTTEKITYDPLPDIEIFVDSY 423
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02017 423 PANTHER UNCHARACTERIZED 2 420 IPR010378 GO:1990072(PANTHER)
Cobi2g02017 423 Pfam Protein of unknown function (DUF974) 72 302 IPR010378 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02017 K20310 trafficking protein particle complex subunit 13
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:62132506 Cobi8g02425 Cobi-Chr8:74086848 dispersed