Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi2g02194 | ATGGGCAATTACAAGTTCAAATTCTCTTGGTTTCACTCTTCCAATAAAACCCAACACCTCACAACTTCCTCCTCTTCCTCTTCTTCATCCTCCTCCTTTCAATTATCTCAACCTTCACCTGACCAAAGAAAATCATATTACTTCACTAGAGAACTAACACAACCTCTACCCGACCCGACCCGTATTCCAGACCCGCCAAGAAAATCCACCAAGAAAAAAAAACCAACTTCCCCAGCTCGCCGGAAATTAAAGTCACCGGAGACATTGAAAAACAATACGTTACACGACAACGTTTATAGGAAAGCTGAACTCCCTCGGATAATAACAAAACCCACGAAGGAAAACGAATTCGGGTCGGAAAAATGGGTTATTGATGGAGCAAGTCGGAGTTTATCGGTTCGGGTTGTGAAGGAGGGTATTATCGGAAGCCCGGTGAGAAAATCGAAAGGGAACGTTTACTCGCCGAGGTTAGGGAACCGGGTTCGGGTTAACGGGTTAAGCGGCGGACGGAGGAGAAGTGGGACCCGGCGGAGCTTGTCGGAAAGTTTGGCGGTTGTGAAGACATCGGTGGATCCTGGGAGGGATTTTAAGGAATCAATGGTTGAGATGATAATGGAGAATAATATGAAGAGTTCTAAAGATTTGGAAGATCTTCTTGCATGTTATCTTGCATTGAATTCAGATGAGTATCATGACTTGATCATCAAGGTATTCAAACAAATTTGGTTTGAGAGTACTGATATTAGACTGTAG | 753 | 43.82 | MGNYKFKFSWFHSSNKTQHLTTSSSSSSSSSSFQLSQPSPDQRKSYYFTRELTQPLPDPTRIPDPPRKSTKKKKPTSPARRKLKSPETLKNNTLHDNVYRKAELPRIITKPTKENEFGSEKWVIDGASRSLSVRVVKEGIIGSPVRKSKGNVYSPRLGNRVRVNGLSGGRRRSGTRRSLSESLAVVKTSVDPGRDFKESMVEMIMENNMKSSKDLEDLLACYLALNSDEYHDLIIKVFKQIWFESTDIRL | 250 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi2g02194 | 250 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 24 | 244 | IPR038933 | GO:0045892(InterPro) | |
| Cobi2g02194 | 250 | Pfam | Transcriptional repressor, ovate | 189 | 244 | IPR006458 | - | |
| Cobi2g02194 | 250 | MobiDBLite | consensus disorder prediction | 16 | 49 | - | - | |
| Cobi2g02194 | 250 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 184 | 243 | IPR006458 | - | |
| Cobi2g02194 | 250 | ProSiteProfiles | OVATE domain profile. | 185 | 244 | IPR006458 | - | |
| Cobi2g02194 | 250 | MobiDBLite | consensus disorder prediction | 16 | 94 | - | - | |
| Cobi2g02194 | 250 | MobiDBLite | consensus disorder prediction | 80 | 94 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi2g02194 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1791033 | Cobi | Cobi1g01905 | Cobi-Chr1:68903461 | Cobi2g02194 | Cobi-Chr2:67652664 | |
| 1795151 | Cobi | Cobi2g02194 | Cobi-Chr2:67652664 | Cobi4g00531 | Cobi-Chr4:4855116 | |
| 1819981 | Cobi | Cobi2g02194 | Cobi-Chr2:67652664 | Cobi7g00910 | Cobi-Chr7:7305750 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Cobi | Ovate | 3e-24 | No_clan | TF | OFP |