AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02219 ATGTTGACCCTTCAATCTCCGGTGACCGGAACCCAGCTCCCCCGGCCGAAACCCTCCCGCCGGCCTCTCCAACCTCTGAAAACCCAATCCAATATCCCACCGATCACCAGCAGCCACCAAAAACCACCTCCAAAGCCGAGATCTATCAACAAGGAGAATGATGGAACTGAATCATATGGTTCTCCAATCTCTATTGTGTCCTCAGCCACTCCCGAGCAGTTTGAAGTATCGTTAGCGGACGAATTAAACGCGATCCGTGAAAAAATGGAGCGGTTGAAGGCGGATAGAGAGAGAACGGAGAAGATGCTGAGAGAGAGGGAGGTGATGATGGAGATGAAGATGAAGGAGCTTCATCAGAGAGGTGAGATCCAGAAGGTGCTTGAGATTGAAGTCGATCGCCTTTATAGGTTAAACGAGCTCAGATCCGTATGCAATAGGATTTTGCCGATTAGATCGTTGAGAGAGAAGATGGAAGAAAGAGAAGCAAAGGGCCAATGA 498 49.2 MLTLQSPVTGTQLPRPKPSRRPLQPLKTQSNIPPITSSHQKPPPKPRSINKENDGTESYGSPISIVSSATPEQFEVSLADELNAIREKMERLKADRERTEKMLREREVMMEMKMKELHQRGEIQKVLEIEVDRLYRLNELRSVCNRILPIRSLREKMEEREAKGQ 165
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02219 165 PANTHER MYELIN TRANSCRIPTION FACTOR 1 163 - -
Cobi2g02219 165 MobiDBLite consensus disorder prediction 53 67 - -
Cobi2g02219 165 Coils Coil 75 109 - -
Cobi2g02219 165 MobiDBLite consensus disorder prediction 1 67 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02219 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1788390 Cobi Cobi12g01444 Cobi-Chr12:12412717 Cobi2g02219 Cobi-Chr2:68496927