Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi2g02222 | ATGGGACTTTGCTGCTCCTCGCCTCGGGCTGATGAAGAAGAGACCAACATTCATACTAAGTTTGATGGCGGTAATGTGACTCTCATCACTACCAAAAATGCTTGGGACCAAAAGCTATCAGAAGCAAAGACACAAGGCAAAATAGTGATCGGCAACTTTAGTGCATCTTGGTGTGGTCCATGCAAGTCAATGGCGCCACACTACGTTGAGCTATCAGAGAAGTATCCTTCGCTTATGTTTTTGACGGTAGATGTCGACGAGTTAAAGGAGTTAAGCACACAAATGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAAAGATGGTCAACAATTTGATAAACTTGTGGGAGCAAACAAGCCTGAACTGCAGAAAAAAATAACCTCTGTTGTTGATTCACAATAA | 405 | 41.73 | MGLCCSSPRADEEETNIHTKFDGGNVTLITTKNAWDQKLSEAKTQGKIVIGNFSASWCGPCKSMAPHYVELSEKYPSLMFLTVDVDELKELSTQMDVKATPTFFFFKDGQQFDKLVGANKPELQKKITSVVDSQ | 134 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi2g02222 | 134 | CDD | TRX-family | 39 | 127 | - | - | |
| Cobi2g02222 | 134 | SUPERFAMILY | Thioredoxin-like | 21 | 131 | IPR036249 | - | |
| Cobi2g02222 | 134 | ProSiteProfiles | Thioredoxin domain profile. | 20 | 132 | IPR013766 | - | |
| Cobi2g02222 | 134 | Pfam | Thioredoxin | 27 | 128 | IPR013766 | - | |
| Cobi2g02222 | 134 | PANTHER | THIOREDOXIN | 24 | 129 | IPR050620 | - | |
| Cobi2g02222 | 134 | PRINTS | Thioredoxin family signature | 96 | 107 | - | - | |
| Cobi2g02222 | 134 | PRINTS | Thioredoxin family signature | 57 | 66 | - | - | |
| Cobi2g02222 | 134 | PRINTS | Thioredoxin family signature | 49 | 57 | - | - | |
| Cobi2g02222 | 134 | Gene3D | Glutaredoxin | 1 | 134 | - | - | |
| Cobi2g02222 | 134 | FunFam | Thioredoxin | 23 | 132 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi2g02222 | K03671 | thioredoxin |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 377583 | Cobi2g02222 | Cobi6g01050 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1795176 | Cobi | Cobi2g02222 | Cobi-Chr2:68528731 | Cobi9g03115 | Cobi-Chr9:74118405 | |
| 1821076 | Cobi | Cobi4g00064 | Cobi-Chr4:1082904 | Cobi2g02222 | Cobi-Chr2:68528731 | |
| 1821432 | Cobi | Cobi4g01827 | Cobi-Chr4:26274678 | Cobi2g02222 | Cobi-Chr2:68528731 | |
| 1849449 | Cobi | Cobi2g02222 | Cobi-Chr2:68528731 | Cobi6g01050 | Cobi-Chr6:8434500 |