Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi2g02229 | ATGAATCCAATTTTAGTGGTTTTTGTGGGGTGGGGTAATATAGCAGAGATTCCAACAACTCACTCACTCACTCACTCACTCAGTCCACCACATTTATTATTATTCACCTCTAAACTCCTTCTACTTTCGGCTTCCACCACCGGCAATCATTCATATTACATACTCTCTCTCTACAGGCATCACAATAATAATAATAATAATAATAATATGTCTGCCGGTGCTCACCTTCATCTATCTCCGGTTACCGGAAACAACCGTTGTTTCAATCCTGTTACGCATATACCTAACCTCCGCTTACCAAACCCTACCTGCGTCGATTTCACCGGTTTCTCTCTCCGATTGAAGCCAGATTTATTATCCTTACACGCGGTTCCCTGCGCTGGCGGTGGTTCTGGTGTCGGTCACGGCAGCGGCGGTGGAGGTGACGGTGACGGTGGAAGTGGCGACTGGAGCCACGGTGACGAATCGTCATCGGCAGACAGTTTCGGTCCGATTGGGGCTTTTCTTAGCGGTTGGAGATCTAGGGTTGCAGCGGATCCCCAGTTTCCGTTTAAGGTGTTGATGGAAGAAGTTGTTGGTGTGAGTGCTAACGTGTTCGGTGACATGGCGACTCGTCCGAATTTCGGTTTAAACGAGCTCGATTTCGTGTTCTCCACACTTGTTGTCGGTTCGATATTGAATTTCACCCTAATGTACTTATTAGCCCCTACCATGACATCTGGCTCAGCCTCTCTCCCTTTCATATTTGCCAACTCACCACCGAGCCACATGTTCGAGTCAGGCGCGTACACCCTGGTTAACCGGCTAGGCACGTTCGTCTACAAAGGAACCGTGTTTGCAGCTGTGGGTTTTGCAGCTGGGTTAGTAGGAACCGCGTTGTCAAATGGGCTTATCAAGATGAGGAAGCAGATGGACCCGAGTTTTGAATCACCAAACAAGGCCCCACCCACGGTTTTAAATGCGGCCACGTGGGCGATTCATATGGGTATAAGTAGTAATTTGAGGTACCAAAGTTTGAATGGGGTTGAGTTCATGTTGGCTAAAGGGTTGTCACCGTTGTTGTTCAAGAGCTCGGTGGTCGGGTTGAGGTTGGTGAATAATGTGCTGGGTGGGATGACATTTGTGATGCTGGCGAGGTTGACCGGTTCGCAGAGTGCAGGTGGAGAAGATGACAAGGTGGTTTATGAAGAGAGTTCAGATGAGGAGAAGAAGTTGTTGGGTGATGAAATTGCATCAAAGTAA | 1242 | 48.23 | MNPILVVFVGWGNIAEIPTTHSLTHSLSPPHLLLFTSKLLLLSASTTGNHSYYILSLYRHHNNNNNNNNMSAGAHLHLSPVTGNNRCFNPVTHIPNLRLPNPTCVDFTGFSLRLKPDLLSLHAVPCAGGGSGVGHGSGGGGDGDGGSGDWSHGDESSSADSFGPIGAFLSGWRSRVAADPQFPFKVLMEEVVGVSANVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMTSGSASLPFIFANSPPSHMFESGAYTLVNRLGTFVYKGTVFAAVGFAAGLVGTALSNGLIKMRKQMDPSFESPNKAPPTVLNAATWAIHMGISSNLRYQSLNGVEFMLAKGLSPLLFKSSVVGLRLVNNVLGGMTFVMLARLTGSQSAGGEDDKVVYEESSDEEKKLLGDEIASK | 413 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi2g02229 | 413 | MobiDBLite | consensus disorder prediction | 390 | 413 | - | - | |
| Cobi2g02229 | 413 | Pfam | Protein RETICULATA-related | 175 | 342 | IPR021825 | - | |
| Cobi2g02229 | 413 | MobiDBLite | consensus disorder prediction | 384 | 413 | - | - | |
| Cobi2g02229 | 413 | MobiDBLite | consensus disorder prediction | 134 | 159 | - | - | |
| Cobi2g02229 | 413 | PANTHER | PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED | 110 | 386 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi2g02229 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 377584 | Cobi2g02229 | Cobi6g01049 |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 1817375 | Cobi | Cobi10g01411 | Cobi-Chr10:15911407 | Cobi2g02229 | Cobi-Chr2:68643313 | |
| 1824539 | Cobi | Cobi9g01368 | Cobi-Chr9:52148140 | Cobi2g02229 | Cobi-Chr2:68643313 | |
| 1849450 | Cobi | Cobi2g02229 | Cobi-Chr2:68643313 | Cobi6g01049 | Cobi-Chr6:8426347 |