AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02229 ATGAATCCAATTTTAGTGGTTTTTGTGGGGTGGGGTAATATAGCAGAGATTCCAACAACTCACTCACTCACTCACTCACTCAGTCCACCACATTTATTATTATTCACCTCTAAACTCCTTCTACTTTCGGCTTCCACCACCGGCAATCATTCATATTACATACTCTCTCTCTACAGGCATCACAATAATAATAATAATAATAATAATATGTCTGCCGGTGCTCACCTTCATCTATCTCCGGTTACCGGAAACAACCGTTGTTTCAATCCTGTTACGCATATACCTAACCTCCGCTTACCAAACCCTACCTGCGTCGATTTCACCGGTTTCTCTCTCCGATTGAAGCCAGATTTATTATCCTTACACGCGGTTCCCTGCGCTGGCGGTGGTTCTGGTGTCGGTCACGGCAGCGGCGGTGGAGGTGACGGTGACGGTGGAAGTGGCGACTGGAGCCACGGTGACGAATCGTCATCGGCAGACAGTTTCGGTCCGATTGGGGCTTTTCTTAGCGGTTGGAGATCTAGGGTTGCAGCGGATCCCCAGTTTCCGTTTAAGGTGTTGATGGAAGAAGTTGTTGGTGTGAGTGCTAACGTGTTCGGTGACATGGCGACTCGTCCGAATTTCGGTTTAAACGAGCTCGATTTCGTGTTCTCCACACTTGTTGTCGGTTCGATATTGAATTTCACCCTAATGTACTTATTAGCCCCTACCATGACATCTGGCTCAGCCTCTCTCCCTTTCATATTTGCCAACTCACCACCGAGCCACATGTTCGAGTCAGGCGCGTACACCCTGGTTAACCGGCTAGGCACGTTCGTCTACAAAGGAACCGTGTTTGCAGCTGTGGGTTTTGCAGCTGGGTTAGTAGGAACCGCGTTGTCAAATGGGCTTATCAAGATGAGGAAGCAGATGGACCCGAGTTTTGAATCACCAAACAAGGCCCCACCCACGGTTTTAAATGCGGCCACGTGGGCGATTCATATGGGTATAAGTAGTAATTTGAGGTACCAAAGTTTGAATGGGGTTGAGTTCATGTTGGCTAAAGGGTTGTCACCGTTGTTGTTCAAGAGCTCGGTGGTCGGGTTGAGGTTGGTGAATAATGTGCTGGGTGGGATGACATTTGTGATGCTGGCGAGGTTGACCGGTTCGCAGAGTGCAGGTGGAGAAGATGACAAGGTGGTTTATGAAGAGAGTTCAGATGAGGAGAAGAAGTTGTTGGGTGATGAAATTGCATCAAAGTAA 1242 48.23 MNPILVVFVGWGNIAEIPTTHSLTHSLSPPHLLLFTSKLLLLSASTTGNHSYYILSLYRHHNNNNNNNNMSAGAHLHLSPVTGNNRCFNPVTHIPNLRLPNPTCVDFTGFSLRLKPDLLSLHAVPCAGGGSGVGHGSGGGGDGDGGSGDWSHGDESSSADSFGPIGAFLSGWRSRVAADPQFPFKVLMEEVVGVSANVFGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTMTSGSASLPFIFANSPPSHMFESGAYTLVNRLGTFVYKGTVFAAVGFAAGLVGTALSNGLIKMRKQMDPSFESPNKAPPTVLNAATWAIHMGISSNLRYQSLNGVEFMLAKGLSPLLFKSSVVGLRLVNNVLGGMTFVMLARLTGSQSAGGEDDKVVYEESSDEEKKLLGDEIASK 413
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02229 413 MobiDBLite consensus disorder prediction 390 413 - -
Cobi2g02229 413 Pfam Protein RETICULATA-related 175 342 IPR021825 -
Cobi2g02229 413 MobiDBLite consensus disorder prediction 384 413 - -
Cobi2g02229 413 MobiDBLite consensus disorder prediction 134 159 - -
Cobi2g02229 413 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 110 386 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02229 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
377584 Cobi2g02229 Cobi6g01049
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1817375 Cobi Cobi10g01411 Cobi-Chr10:15911407 Cobi2g02229 Cobi-Chr2:68643313
1824539 Cobi Cobi9g01368 Cobi-Chr9:52148140 Cobi2g02229 Cobi-Chr2:68643313
1849450 Cobi Cobi2g02229 Cobi-Chr2:68643313 Cobi6g01049 Cobi-Chr6:8426347