AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02230 ATGCATATGAGGCTTCAATTTCATAGTCTGCTGCTAATGTGCTGCTGCTTCTTCTGGTGGCCAATTGTTGAATCTCAAGTATCTAATCCTCTGCCAAAACCTGCAAGGGCTCTTGATGCAACCTTACAGGACTATGCGTATCGCGCATTCGTTCATCCGCGTACCGGTATTCCCTTTGACGCCGCTGTTCCATCCTATTTGACCGGGATTGAGATATCCGCGATGCGCCTCAGAAGCGGTAGTCTGTATCGTAGAGGCGTTCAGACGTTTAGGGAATTTGTTATTCCTGTTGGATTAAGAGAGCAGCCATATGTTGAGAGACTTGTTCTGGTGTATCAAAATTTAGGAAACTGGTCCACAACTTATTACTCTTTACCTGGTTACATTTATCTTGCTCCAGTATTAGGTCTTCTTGCTTACAACGGTTCAGATTTATCGGCTTCTAATCTACCGGAGCTCGATTTTTGGGCTTCTGAGGATGCCATTACAGTAAAATTTGGAAGAATTAGCCCAATACCGGTCGGTTCAGTTGCAAAGTGTGCTTGGTTTGATCTTCATGGTGAAGTAAACTTCACAAGTATGTTATCTGGCAATGTATGTTCAACAACTGAACAGGGTCATTTTTCCATTGTAGCTGAAACAGCTATTGCACCTGTTCCAGTACCCCCTGCACCACCTGAACCTGCACCATCTGATCATACACATAACAGTAGAAAGAACAATGAGGCTAGGGTTTGGGGTATTATTGGGGCAGCAACGGGTGGAACCGCATTGTTGGTGTTGTTAGCATTGTTGATATTGTGGGCATTGCGGTACAAGAAGAGAAAACGGATGCGCGAGTTAGAGCGCGCTGCAGATGCTGGTGAAGCATTGAGGATGACAAGAATTGGGAGTATGAGAGCACCATTTGCATTGGGTACAAGAACAATGCCGAGTTTTGAAACAGAATTTGATGCTTGA 960 44.58 MHMRLQFHSLLLMCCCFFWWPIVESQVSNPLPKPARALDATLQDYAYRAFVHPRTGIPFDAAVPSYLTGIEISAMRLRSGSLYRRGVQTFREFVIPVGLREQPYVERLVLVYQNLGNWSTTYYSLPGYIYLAPVLGLLAYNGSDLSASNLPELDFWASEDAITVKFGRISPIPVGSVAKCAWFDLHGEVNFTSMLSGNVCSTTEQGHFSIVAETAIAPVPVPPAPPEPAPSDHTHNSRKNNEARVWGIIGAATGGTALLVLLALLILWALRYKKRKRMRELERAADAGEALRMTRIGSMRAPFALGTRTMPSFETEFDA 319
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02230 319 PANTHER PROTEIN, PUTATIVE (DUF1191)-RELATED 13 317 IPR010605 GO:0016020(PANTHER)
Cobi2g02230 319 Pfam Protein of unknown function (DUF1191) 34 212 IPR010605 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02230 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
69710 Cobi11g02676 Cobi2g02230
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1795180 Cobi Cobi2g02230 Cobi-Chr2:68655877 Cobi4g01849 Cobi-Chr4:27205353
1820469 Cobi Cobi3g00423 Cobi-Chr3:4849970 Cobi2g02230 Cobi-Chr2:68655877
1823818 Cobi Cobi7g03287 Cobi-Chr7:76907310 Cobi2g02230 Cobi-Chr2:68655877
1839347 Cobi Cobi11g02676 Cobi-Chr11:70458461 Cobi2g02230 Cobi-Chr2:68655877