AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02252 ATGAGTAATAGCAATAACAATAATAATCCAGGCGGAGGCTCATCGAAAGCCAGAGTTGGATCATCTCAGCCTTCCGAAACATCATTCAAACGCAAGCGAGGAGTTTTTCAGAAAGATTTACAACATATGATGTATGGCTTTGGAGATGATCCTAATCCGTTGCCCGAAACTGTTGCTCTTGTGGAGGATATTGTTGTTGAGTATGTGACGGATATGGTGCATAAAGCCCAGGACATTGCATCAAAGAGGGGAAAGCTTTTGACCGAAGATTTCTTGTTCTTGATCCGCAAGGACTTGCCAAAGTTAAACCGTTGTACAGAACTGCTGTCAATGAATGAAGAACTGAAACAAGCAAGGAAGGCTTTTGATGTGGATGAGGAGAAACTGGCATCAGCCGAGTGA 402 43.03 MSNSNNNNNPGGGSSKARVGSSQPSETSFKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYVTDMVHKAQDIASKRGKLLTEDFLFLIRKDLPKLNRCTELLSMNEELKQARKAFDVDEEKLASAE 133
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02252 133 Coils Coil 108 128 - -
Cobi2g02252 133 MobiDBLite consensus disorder prediction 1 33 - -
Cobi2g02252 133 FunFam Transcription initiation factor TFIID subunit 13 35 79 - -
Cobi2g02252 133 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID-SUPT3-RELATED 8 130 IPR003195 GO:0006366(InterPro)|GO:0006366(PANTHER)
Cobi2g02252 133 Gene3D Histone, subunit A 35 79 IPR009072 GO:0046982(InterPro)
Cobi2g02252 133 SUPERFAMILY Histone-fold 36 78 IPR009072 GO:0046982(InterPro)
Cobi2g02252 133 CDD TAF13 33 123 IPR003195 GO:0006366(InterPro)
Cobi2g02252 133 MobiDBLite consensus disorder prediction 1 30 - -
Cobi2g02252 133 Pfam Transcription initiation factor IID, 18kD subunit 35 123 IPR003195 GO:0006366(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02252 K03127 transcription initiation factor TFIID subunit 13