Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi2g02255	ATGAAGTACGTGTTGGTGACCGGAGGCGTCGTTAGCGGCCTCGGCAAGGGCGTAACCGCCAGTAGCATTGGCGTCGTTCTCAAGGCATGTGGCCTTCGTGTCACCTCTATCAAAATCGATCCGTATTTGAACACCGATGCCGGTACCATGTCTCCGTTTGAACACGGAGAGGTTTTTGTTCTTGATGATGGCGGAGAGGTCGATCTGGATCTCGGTAACTATGAGCGGTTCTTAGATGTGAGACTTACTAGGGATAACAACATAACCACTGGAAAGATCTATCAGTCGGTTCTTGAGAAGGAGCGAAAAGGTGATTACCTTGGAAAGACTGTCCAGGTGGTCCCACACATAACAGATGCAATAAAGGATTGGATTGAGTCGGTTTCTACTATCCCGGTTGATGGCAAAGAGGGCCCTGCAGATGTGTGCGTTATTGAATTAGGAGGAACAGTTGGTGACATTGAGTCTATGCCGTTTATTGAGGCTTTGCGACAGTTATTTTTCTCAAAAGGACCAGATAATTTCTGCCTGATTCATGTTAGCCTTGTACCTGTGCTTGGTGTTGTTGGGGAACAGAAAACAAAACCTACACAACACAGTGTTCGAGAACTGCGAGCGTTAGGCCTAACACCTCACTTTTTAGCATGTCGGTCCGCTCAGCCACTGTTGGAAAATACAAAGCAGAAACTCTCACAATTCTGCCATGTGCCTGGTGCTAACATTCTCAATATCCATGATGTACCAAACATTTGGCACGTCCCTCTTTTACTTCGTAACCAAAATGCTCATGAGGCTATCCTAAAACAACTAGCACTAGTTAGTGTAGCCAAAATTCCAAATTTGCAAGAATGGACTACTAGAGCTGAAACTTTTGACAGTCTCACCAATTCCGTCAAGATTGCAATGGTGGGAAAATATGTTGGTCTAACCGACTCTTATTTGTCTGTTACAAAGGCCCTTCTTCATGCCTGCATTGCATGTTCATTAAAACCTTCAATTGAATGGATTGCAGCTTCTGATCTTGAAGATGAAAGTGCCAAATCGACACCAGATGCTCATTCAAAGGCATGGGAGACACTAAGGAATTCAGCATGTGTTTTGGTTCCTGGTGGATTTGGTGACCGTGGTGTGAACGGAATGATATTAGCTGCTAAATATGCCAGAGAAAATAAAGTTCCATATCTTGGAATTTGTTTAGGCATGCAGATTTCTGTTATTGAGATCTCTAGATCGATTTTGGGTTGGAAAGGGGCAAACAGTACTGAATTTGATGAGCACACACCAAATCCTGTTGTAATATTCATGCCAGAGGGTTCCCGAACACACATGGGGAACACAATGCGACTTGGTTCTAGAAGAACTTTACTGCAGACTGCTGACTGTATCACTGCAAAACTGTATCACAATCCAGAGTATGTGGATGAGCGACATCGCCATCGATATGAGGTGAATCCTGAGGTTGTCGGAGATTTAGAAAAGACTGGGTTAAGATTTGTGGGGAAGGATGAAAGTGGTCAACGGATGGAGATTTTAGAGCTTCAAAGCCATCCATTCTATGTGGGAGTACAGTTTCATCCTGAATATAAATCGCGCCCTGGAAAGCCTTCGGCACTATTTTTAGGTCTTGTATTAGCAGCAACAGGGCAGTTGGAAGCGTATGTGAAGTCACATCAGAATGGATCTGTTTAG	1689	44.17	MKYVLVTGGVVSGLGKGVTASSIGVVLKACGLRVTSIKIDPYLNTDAGTMSPFEHGEVFVLDDGGEVDLDLGNYERFLDVRLTRDNNITTGKIYQSVLEKERKGDYLGKTVQVVPHITDAIKDWIESVSTIPVDGKEGPADVCVIELGGTVGDIESMPFIEALRQLFFSKGPDNFCLIHVSLVPVLGVVGEQKTKPTQHSVRELRALGLTPHFLACRSAQPLLENTKQKLSQFCHVPGANILNIHDVPNIWHVPLLLRNQNAHEAILKQLALVSVAKIPNLQEWTTRAETFDSLTNSVKIAMVGKYVGLTDSYLSVTKALLHACIACSLKPSIEWIAASDLEDESAKSTPDAHSKAWETLRNSACVLVPGGFGDRGVNGMILAAKYARENKVPYLGICLGMQISVIEISRSILGWKGANSTEFDEHTPNPVVIFMPEGSRTHMGNTMRLGSRRTLLQTADCITAKLYHNPEYVDERHRHRYEVNPEVVGDLEKTGLRFVGKDESGQRMEILELQSHPFYVGVQFHPEYKSRPGKPSALFLGLVLAATGQLEAYVKSHQNGSV	562

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi2g02255	562	CDD	GATase1-CTP-Synthase	298	543	IPR033828	GO:0003883(InterPro)\|GO:0006241(InterPro)
	Cobi2g02255	562	Pfam	Glutamine amidotransferase class-I	309	542	IPR017926	-
	Cobi2g02255	562	NCBIfam	CTP synthase (glutamine hydrolyzing)	1	544	IPR004468	GO:0003883(InterPro)\|GO:0006221(InterPro)
	Cobi2g02255	562	Pfam	CTP synthase N-terminus	2	272	IPR017456	GO:0003883(InterPro)\|GO:0006221(InterPro)
	Cobi2g02255	562	CDD	CTPS-N	2	268	IPR017456	GO:0003883(InterPro)\|GO:0006221(InterPro)
	Cobi2g02255	562	PANTHER	CTP SYNTHASE	1	558	IPR004468	GO:0003883(PANTHER)\|GO:0003883(InterPro)\|GO:0006221(InterPro)\|GO:0006241(PANTHER)\|GO:0019856(PANTHER)\|GO:0042802(PANTHER)
	Cobi2g02255	562	Gene3D	-	295	560	IPR029062	-
	Cobi2g02255	562	FunFam	CTP synthase	1	292	-	-
	Cobi2g02255	562	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	1	272	IPR027417	-
	Cobi2g02255	562	ProSiteProfiles	Glutamine amidotransferase type 1 domain profile.	299	552	-	-
	Cobi2g02255	562	Gene3D	-	1	292	IPR027417	-
	Cobi2g02255	562	SUPERFAMILY	Class I glutamine amidotransferase-like	297	548	IPR029062	-
	Cobi2g02255	562	FunFam	CTP synthase	295	560	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi2g02255	K01937	CTP synthase [EC:6.3.4.2]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	377588	Cobi2g02255	Cobi6g01036

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	1791294	Cobi	Cobi1g02244	Cobi-Chr1:73116139	Cobi2g02255	Cobi-Chr2:69206085
	1792312	Cobi	Cobi1g03588	Cobi-Chr1:84703883	Cobi2g02255	Cobi-Chr2:69206085
	1794786	Cobi	Cobi2g01757	Cobi-Chr2:45042999	Cobi2g02255	Cobi-Chr2:69206085
	1795199	Cobi	Cobi2g02255	Cobi-Chr2:69206085	Cobi9g01788	Cobi-Chr9:61835324
	1849457	Cobi	Cobi2g02255	Cobi-Chr2:69206085	Cobi6g01036	Cobi-Chr6:8307971