AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02258 ATGAAAACTAGATCAAGATCGGATGTGAGCCGAAGAGCATGGCGCATTTTACGGTTAGCCTTGTTATGGGCTAGAAAAGGTGGAGTGCTCAAAAAAAGGTTTATGCTTGACTTGTCTCATTATCTCAAGACTCTTGGTCAATCCAAAAAGGGCAATGGCGCGTTACAATATGGTGATCGGCAGCTATCGTTCGATGCAACGCCTATTATTCATGTTAGGATGCACCGGCCAAACTCGATGAGGTTTCGGTTGCCTCACATTCCATGCATTAAGCCACATGTTGATTGTAAGGATATGTTTGATTTTGATGATGAGAGTGATCGGTACTCGATTTGTGAAGCAAGAAATAGTTTCTTGATCGGAAATAGCGAAGAATATGATGATGAATATGATGAGGAAACATGTGAGGAACAAGAGATGGGGATAGATATAAAGGCTCAACAGTTTATAGACAACTTTTATGAGCAGCTTAAGCTTCAAAGGCTACATGCCACCAGAAGAATAACATTAGGCTAG 516 41.09 MKTRSRSDVSRRAWRILRLALLWARKGGVLKKRFMLDLSHYLKTLGQSKKGNGALQYGDRQLSFDATPIIHVRMHRPNSMRFRLPHIPCIKPHVDCKDMFDFDDESDRYSICEARNSFLIGNSEEYDDEYDEETCEEQEMGIDIKAQQFIDNFYEQLKLQRLHATRRITLG 171
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02258 171 Pfam Cotton fibre expressed protein 142 167 IPR008480 -
Cobi2g02258 171 PANTHER AVR9-CF-9 RAPIDLY ELICITED PROTEIN-RELATED 8 164 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02258 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
377589 Cobi2g02258 Cobi6g01035
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1849458 Cobi Cobi2g02258 Cobi-Chr2:69226340 Cobi6g01035 Cobi-Chr6:8306213