AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02263 ATGGGAGGTTTGAAACGATACTGGCGGAAGAGAGGCTACAGCCGCCTCGGGGCCACCGATGAACTCCGACCAAAGCGACGGAGATGGTCCTGGAAGGTACGGATGCCGCGCCGGGTGAAGATAAAGTTGAGGTTTAATCCCAAGAAGATAATTGCTAGGGTTCAAGAGGCTTACGTGAGTATGATGATGCGACTGGCGAGTTCGCCGGTGGTAAGAGGCGGAGGTATAACGGAGTTTGGAATGAGACCCATGAAGGAGTATGATGAGAAGATGATAGTTCAGATGTATAACTCGTTGGTTATGAGACAGGCTGAACTTAAAGCACTTGAGGTTCAGCCTGCTCCGATGATCCGGTAA 357 50.7 MGGLKRYWRKRGYSRLGATDELRPKRRRWSWKVRMPRRVKIKLRFNPKKIIARVQEAYVSMMMRLASSPVVRGGGITEFGMRPMKEYDEKMIVQMYNSLVMRQAELKALEVQPAPMIR 118
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02263 118 PANTHER BNAA09G40010D PROTEIN 2 107 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02263 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
377590 Cobi2g02263 Cobi6g01034
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1787152 Cobi Cobi11g02709 Cobi-Chr11:70723669 Cobi2g02263 Cobi-Chr2:69305065
1847754 Cobi Cobi2g02263 Cobi-Chr2:69305065 Cobi4g00660 Cobi-Chr4:5965762
1849459 Cobi Cobi2g02263 Cobi-Chr2:69305065 Cobi6g01034 Cobi-Chr6:8301366