AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02269 ATGGAATCATCAAGTGCTAAGCGATTCGCTTTGATTCTTGTTTTGTTGTCGGTGATTGTTGTGTTTGCTTCGGCCGACAATGGCTATGGGAAATCGCAGACAGAGGCATACGTTCCACAAAAACCCGCTACACCAAAAGAGCAAACGGGTTATGAAAAACCCAAGCCTAAGTTGCCAACAAAGGTTGTGGTACCAAAAGAGGAACATGCCGGTTACAAGAAGGTTGATCCTAAGATACCAACAAAGGTTGTGGTACCAAAAGAGGAATACGAGAAGCCTAAGCCAAAGGTACCGAAAGTGGAACATGGAGACTATGATAAAAGTTATCCTAAGTTACCAACAAAGCCCTCGGTACCAAAAGAGGAGCACGGAGCCTATGAGAAGGTACCGACAAAACCGGACCTTAAAAGCTATGAAAAACCATTTGTAACAAAGAACATAGCCGTTCAAGGTCTTATTTATTGTAAATACGGTTCCAAACTCCTCCCACTTCAAGGAGCGACTGCAAGAGTGACTTGTTTAGCAGTGCACAAGAACGGATATGAATCTGCACCATTTTCATTCTCGAGTTGTCCAGCAAACGAAAAGGGTTACTTCTTGGCAAAAATACCATCATCAAAGCTTGTAAAAGACGATTTATGGGAGATCACAGAGTGCAAGGCATTCCTTGAAAACTCGCCATGGACGAGTTGCAAGGTTCCAGAAGATACCAATGGAGGAATTACTGGTGCTCGTCTTACATTTTCTCGTCATCTCAACAACAACGGGTTTTGTTTGTCATCAGTAGGACCATTTATATACAATCCGGGACATGAGTCGCTACCCAAGGAAGGTTACTAA 840 43.1 MESSSAKRFALILVLLSVIVVFASADNGYGKSQTEAYVPQKPATPKEQTGYEKPKPKLPTKVVVPKEEHAGYKKVDPKIPTKVVVPKEEYEKPKPKVPKVEHGDYDKSYPKLPTKPSVPKEEHGAYEKVPTKPDLKSYEKPFVTKNIAVQGLIYCKYGSKLLPLQGATARVTCLAVHKNGYESAPFSFSSCPANEKGYFLAKIPSSKLVKDDLWEITECKAFLENSPWTSCKVPEDTNGGITGARLTFSRHLNNNGFCLSSVGPFIYNPGHESLPKEGY 279
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02269 279 PANTHER OS01G0164075 PROTEIN 10 271 - GO:0071944(PANTHER)
Cobi2g02269 279 MobiDBLite consensus disorder prediction 90 127 - -
Cobi2g02269 279 MobiDBLite consensus disorder prediction 30 62 - -
Cobi2g02269 279 MobiDBLite consensus disorder prediction 48 62 - -
Cobi2g02269 279 Pfam Pollen protein Ole e 1 like 149 243 - -
Cobi2g02269 279 MobiDBLite consensus disorder prediction 90 109 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02269 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
377592 Cobi2g02269 Cobi6g01031
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
1795206 Cobi Cobi2g02269 Cobi-Chr2:69399286 Cobi2g02350 Cobi-Chr2:71424923
1823564 Cobi Cobi7g01767 Cobi-Chr7:14789452 Cobi2g02269 Cobi-Chr2:69399286
1849461 Cobi Cobi2g02269 Cobi-Chr2:69399286 Cobi6g01031 Cobi-Chr6:8283249