Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi2g02290	ATGACGTCACCTTCATCTTGGATAACCTCTGTTTCCTGTTCTTCAACCTATGTTGTGTCTCAAAACGCCTCAGTGGCTTCACTTATTATTCAATGGCTGAGATTCATCTTCCTCTCCCCATGCTCTCAAAGAGCTCTTCTATCCACCGTTGATCTCATTTTCCTGTTCACCCTCTTTGTTTTTGCTGCTCAAAAACTCTATTCAAGATTCACATCCAACACATCTGCTGTTAATGAACCTCTGATTAATAAAAACACAGACAGAGATATTAACACCAACATTTGGTTTAAGCTGTCTCTGGTGGCAACTACCGTATTAACACTTTTGTCTACTGTTTCATCAATCCTGGGACTCACCGAAAACACCGAGTCGCCTTGGAAGGAAGTTAATGTAGTTTCTTGGCTAATTCAAGCTTTATGTTTTCTTACAATCACGGTTTTAATCTTCCTTGAAAAGATATTTCAAATCGTAACTCACCCGAAAGCCCTTCGTGTTTTCTGGGGAGTAAATTTCGTCTTCGTTGCATTGTCGGCTTGTTCGGGTATCATCCGCGGATGGGCATCAGCTTCAATCACATCAAAACTATTTTGGCAATGGATGAACCCGTTGTTAACAAAAGGATACAAAACCCCGCTAAAACTCCAAGACATCCCGACGCTCTCACCCGAGCATCGAGCCGAGAAAATGTCAAACCTATTCGAGCGAAACTGGCCTAAACCGAATGAAAACTCAAAACACCCGGTTCGAACCACGCTTATCCGATGTTTCTGGAAACACGTCGCATTTAACGGGTGCCTTGCAATTGTAAAGCTCTCGGTTACGTATGCTGGACCGTTGTTGATCAAACGGTTCGTTGATTACACGTCCGGGAAGAGATCGTCACCGTACGAAGGGTATTATTTGATACTAATCCTTCTTGTTGCAAAGTTTATTGAAGTGTTGTCATCCCACCAGTTTAACTTCCACTCTCAGAAGCTTGGAATGTTAATCCGGTCGACGTTGATAACAGCATTGTATAAAAAGGGGTTACGCCTCTCGTGTTCGGCTCGCCAATCGCACGGTGTTGGACAGATAGTTAACTACATGGCAGTTGATGCTCAACAATTGTCTGATATGATGCTTTACATGCATGCTGTTTGGCTTATGCCTTTACAAGTGTCTGTTGCACTTGTTATTCTTTACACGTACATTGGGCTACCATCCGTGGTAACGTTAGTGGGACTAGTGGTGGTTGTGGTTTATGTGATTTTTGGTAATCAAAGGAACAACAGGTTCCAGTTTAATATCATGAAATACCGAGACTCGCGGATGAAAGCGACGAATGAGATGCTTAATTACATGCGGGTGATTAAGTTTCAAGCATGGGAAGAACATTTCAACAAGCGGATTCTAGCGTTTCGCGAGTCTGAATATGGGTGGCTCGCGAAGTTTGGGCTCTCCATTGGTGGGAACGTGATTGTTTTATGGAGTACCCCTTTGTTTATTTCCACGCTCACGTTTGGGAGCGCGGTTTTGCTTGGGGTCCCACTTGACGCGGGCAGTGTATTCACTGCCACGTCATTATTTAAGAACTTGCAAGACCCTATCCGCACGTTTCCTCAGTCGATGATCGCGCTATCGCAGGCGATGATCTCGTTGGAGAGATTGGATAGGTTTATGTTGAGTCAGGAGTTGGATGAGGGGGCGGTGGAGAGGCGGGAGGGTGGAGATGAGACCGCGGTGGAGGTTAGAGATGGGTCTTTTAGCTGGGATGATGAAGCTGCTAATGGTGCAGTAGTTATGGATTTGAACTTTGAGATAAAGAAAGGTGAACTTGCAGCAATTGTTGGGACCGTGGGTTCAGGGAAATCATCTCTTCTTTCGGCAGTTACGGGTGAAATGCACAAAATCTCTGGCAAGGAGTGA	1905	44.67	MTSPSSWITSVSCSSTYVVSQNASVASLIIQWLRFIFLSPCSQRALLSTVDLIFLFTLFVFAAQKLYSRFTSNTSAVNEPLINKNTDRDINTNIWFKLSLVATTVLTLLSTVSSILGLTENTESPWKEVNVVSWLIQALCFLTITVLIFLEKIFQIVTHPKALRVFWGVNFVFVALSACSGIIRGWASASITSKLFWQWMNPLLTKGYKTPLKLQDIPTLSPEHRAEKMSNLFERNWPKPNENSKHPVRTTLIRCFWKHVAFNGCLAIVKLSVTYAGPLLIKRFVDYTSGKRSSPYEGYYLILILLVAKFIEVLSSHQFNFHSQKLGMLIRSTLITALYKKGLRLSCSARQSHGVGQIVNYMAVDAQQLSDMMLYMHAVWLMPLQVSVALVILYTYIGLPSVVTLVGLVVVVVYVIFGNQRNNRFQFNIMKYRDSRMKATNEMLNYMRVIKFQAWEEHFNKRILAFRESEYGWLAKFGLSIGGNVIVLWSTPLFISTLTFGSAVLLGVPLDAGSVFTATSLFKNLQDPIRTFPQSMIALSQAMISLERLDRFMLSQELDEGAVERREGGDETAVEVRDGSFSWDDEAANGAVVMDLNFEIKKGELAAIVGTVGSGKSSLLSAVTGEMHKISGKE	634

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi2g02290	634	ProSiteProfiles	ABC transporter integral membrane type-1 fused domain profile.	265	541	IPR011527	GO:0005524(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)\|GO:0140359(InterPro)
	Cobi2g02290	634	Pfam	ABC transporter	594	633	IPR003439	GO:0005524(InterPro)\|GO:0016887(InterPro)
	Cobi2g02290	634	SUPERFAMILY	ABC transporter transmembrane region	252	553	IPR036640	GO:0005524(InterPro)\|GO:0016020(InterPro)
	Cobi2g02290	634	Gene3D	-	555	633	IPR027417	-
	Cobi2g02290	634	Gene3D	ABC transporter type 1, transmembrane domain	249	554	IPR036640	GO:0005524(InterPro)\|GO:0016020(InterPro)
	Cobi2g02290	634	FunFam	ABC transporter C family member 10	244	557	-	-
	Cobi2g02290	634	Pfam	ABC transporter transmembrane region	262	527	IPR011527	GO:0005524(InterPro)\|GO:0016020(InterPro)\|GO:0055085(InterPro)\|GO:0140359(InterPro)
	Cobi2g02290	634	PANTHER	ATP-BINDING CASSETTE SUB-FAMILY C	186	632	IPR050173	GO:0016020(PANTHER)\|GO:0042626(PANTHER)\|GO:0055085(PANTHER)
	Cobi2g02290	634	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	523	632	IPR027417	-
	Cobi2g02290	634	CDD	ABC-6TM-ABCC-D1	262	549	IPR044746	GO:0140359(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi2g02290	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr2:70000995	Cobi3g00828	Cobi-Chr3:9662223	dispersed
	Cobi	Cobi-Chr2:69869458	Cobi2g02290	Cobi-Chr2:70000995	proximal