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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02303 ATGTATGCAGCATTTGTAATTAATTTTCGATCTCTCTTCATAAATAATATTATCACTACAAAAGATCACTTCTGTTTTAATAAAAAGATGGATGGCATTTTTGGAGAACCAACAAAGTGTACTCGAATAGGAGACGAGTATCAGACACAAATCCCAGATGTAATTATGAAAGAAACCATAAAAAATGAAGAAAACAAATACATAGGTTCTGTAGAAAAGGATGTTCAACTTCCTGCAGTCCCTATACTTGATGAGGATGCTTTTCTTCTTGGTTTATATATATTTGGCAAGAACTTTAATCTTGTGAAGAAATTCATAGCTAACAAGGGAATGCCAGATGTGTTATTTTACTACTATGGACGGTTTTATGGCAATGATAAACGCAAAATATGGTCGAGCTCTTGGATGAATAGAAACAAATTGATGATACCCGGAATGAAGATTTTCAGAGGATGGAGGCTAGAGGAGCTGTTTCTTCGCATATTTCCAAACGTCACAGATGAAAACAGATATCATTTAACAAAGTTTCCTTACAATGTCACCACAAGAAGTGTACAATCTCCATTCATCTCTGCAGCTTCTTTTTTAAGCATGTATACTTAG 603 34.16 MYAAFVINFRSLFINNIITTKDHFCFNKKMDGIFGEPTKCTRIGDEYQTQIPDVIMKETIKNEENKYIGSVEKDVQLPAVPILDEDAFLLGLYIFGKNFNLVKKFIANKGMPDVLFYYYGRFYGNDKRKIWSSSWMNRNKLMIPGMKIFRGWRLEELFLRIFPNVTDENRYHLTKFPYNVTTRSVQSPFISAASFLSMYT 200
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02303 200 PANTHER ATROPHIN-RELATED 84 174 - GO:0003714(PANTHER)|GO:0005634(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02303 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:70481328 Cobi6g01021 Cobi-Chr6:8221654 dispersed
Cobi Cobi-Chr2:70347123 Cobi2g02303 Cobi-Chr2:70481328 proximal