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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02304 ATGTTTGATATCTTCCAGGCTACTAGAAAGCTCAACAATAAAGAAATTGCATTTGAAACATATGTATTTAGTATCATTGATATTATTGGGATCAACATGCTTGTACAAGTAATTTGTATAGGAAAAGGAAAGCTAGATCTTACGTCTAAAGGGTCCAAGAGTAAGTTGAAAAATGAGAAGCTTTACCCGCCATTCTATTCACTTACAACAGATACTGTTATCAATCTTTTGAAATACGAGATTGGTCTAAGTAAAGAGAAGTTAGCTGACTTATTTTGGGAGGCTGTCTGGCCTCGTCTACTTGCACAAGGATGGAACTCTCAGCAGCTAAGAAAATATAATTTCAATAACTCCGAGAATTCGTTGGTGTTTGTCAGAAATCGAAACCCCATTTTATTAAAATCAAGATCACGAATACAACCACACCTTGAATCAAACTACAATACAAACCGTAAGACTCTAATTAGATCATCATTGTGA 480 34.79 MFDIFQATRKLNNKEIAFETYVFSIIDIIGINMLVQVICIGKGKLDLTSKGSKSKLKNEKLYPPFYSLTTDTVINLLKYEIGLSKEKLADLFWEAVWPRLLAQGWNSQQLRKYNFNNSENSLVFVRNRNPILLKSRSRIQPHLESNYNTNRKTLIRSSL 159
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02304 159 PANTHER ATROPHIN-RELATED 7 126 - GO:0003714(PANTHER)|GO:0005634(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02304 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:70487315 Cobi3g00637 Cobi-Chr3:7121883 dispersed
Cobi Cobi-Chr2:70347123 Cobi2g02304 Cobi-Chr2:70487315 proximal