Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi2g02311	ATGATAACGTCATGGTTATCAGTTTCATCTCCTCGATTGAACCTGTTGGTTCGGCCATGGCGAAATCAAACACCGAAGAAGCGAGTGGTTTGCATGGCGGAGCCTTATCTCTTGAAGAAACTCGAATCGGCTGAGAATACCTGGAAAGAGCTATCGGTTAAGTTAGCAGATCCTGATGTGGTTTCAAACCCTAGTGAGTACCAAAAGCTAGCCCAATCAATGTCTGAACTTGATGAGGTTGTAGCAACATACAGAGGATTCAAAGACTGTGAGAAACAGCTTCAAGAGTCCAAAGTTTTATCAAAAGATCCGGACGTTGATGAAGAGATGGCTGAGATGATAGCTTCTGAAATTGAATCTTTATCCGACCAACTTTTAGTGTTTGAAGAAAAACTTAAGATGTTACTGATTCCAACTGATCCTCTGGATTCTAGAAACATTTTGCTTGAAGTTAGGGCTGGTACAGGCGGTGAAGAGGCTGGACTTTGGGCCGCTGACCTTGTTCGTATGTACCAACGGTACTGTGAACGAAATTCGTTGAGATACTCACCACTTTCATCTTCGGAGGCTGAAAGAGGAGGATACAAGACTTATGTTATGGAAGTTAAAGGTGCTCGGGTATATAGTAAACTAAAGTATGAATCAGGTGTCCACAGAGTCCAACGTGTCCCTCAAACCGAAACCCAAGGCCGTATTCACACTTCAACTGCCACAGTGGCCATCATGCCAGAGGCTGAAGAAGTTGATGTGGTAATTGATCCAAAAGATATTGATCTTACAACTGCAAGATCTGGTGGTGCTGGAGGTCAGAATGTGAATAAGGTGGAAACCGCAGTGGATCTTTTCCACAAGCCAACCGGAATCAGAATCTTTTGCACCGAAGAAAGAAGCCAGCTTAAAAATAAAACGCGTGCACTTCAACTATTGCGTGCAAAACTGTATGAAATTAAACTGAAGGAACAACAAGAGTCTCAAAGAAATCAAAGAAAATCTCAGGTTGGTAGTGGCTCTCGTTCAGAAAAGATCCGCACGTATAATTATAAGGACAATAGGGTCACTGATCATAGATTAAAGATGAACTTTGAGCTCACTTCATTTCTTGATGGTGACATTGAGACAGCGATTCAGTCTTGTGCTTCTATGGAGCAAAGGGAATTGCTAGAAGAGCTTGCTGATTCGGTAGGAACTGCAGCACGATAA	1200	42.67	MITSWLSVSSPRLNLLVRPWRNQTPKKRVVCMAEPYLLKKLESAENTWKELSVKLADPDVVSNPSEYQKLAQSMSELDEVVATYRGFKDCEKQLQESKVLSKDPDVDEEMAEMIASEIESLSDQLLVFEEKLKMLLIPTDPLDSRNILLEVRAGTGGEEAGLWAADLVRMYQRYCERNSLRYSPLSSSEAERGGYKTYVMEVKGARVYSKLKYESGVHRVQRVPQTETQGRIHTSTATVAIMPEAEEVDVVIDPKDIDLTTARSGGAGGQNVNKVETAVDLFHKPTGIRIFCTEERSQLKNKTRALQLLRAKLYEIKLKEQQESQRNQRKSQVGSGSRSEKIRTYNYKDNRVTDHRLKMNFELTSFLDGDIETAIQSCASMEQRELLEELADSVGTAAR	399

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi2g02311	399	Gene3D	-	256	318	-	-
	Cobi2g02311	399	FunFam	Peptide chain release factor 1	245	340	-	-
	Cobi2g02311	399	PANTHER	LD18447P	34	393	IPR050057	GO:0009507(PANTHER)\|GO:0009658(PANTHER)\|GO:0010027(PANTHER)\|GO:0032544(PANTHER)
	Cobi2g02311	399	Gene3D	-	143	255	-	-
	Cobi2g02311	399	FunFam	Peptide chain release factor 1	143	253	-	-
	Cobi2g02311	399	SUPERFAMILY	Release factor	46	387	IPR045853	-
	Cobi2g02311	399	Hamap	Peptide chain release factor 1 [prfA].	37	391	IPR004373	GO:0006415(InterPro)\|GO:0016149(InterPro)
	Cobi2g02311	399	ProSitePatterns	Prokaryotic-type class I peptide chain release factors signature.	263	279	IPR000352	GO:0003747(InterPro)\|GO:0006415(InterPro)
	Cobi2g02311	399	FunFam	Peptide chain release factor 1	315	394	-	-
	Cobi2g02311	399	MobiDBLite	consensus disorder prediction	327	341	-	-
	Cobi2g02311	399	SMART	PCRF-a-2	99	214	IPR005139	GO:0006415(InterPro)
	Cobi2g02311	399	MobiDBLite	consensus disorder prediction	320	347	-	-
	Cobi2g02311	399	Pfam	RF-1 domain	246	356	IPR000352	GO:0003747(InterPro)\|GO:0006415(InterPro)
	Cobi2g02311	399	Gene3D	-	29	141	-	-
	Cobi2g02311	399	NCBIfam	peptide chain release factor 1	33	391	IPR004373	GO:0006415(InterPro)\|GO:0016149(InterPro)
	Cobi2g02311	399	Gene3D	-	319	394	-	-
	Cobi2g02311	399	Pfam	PCRF domain	45	239	IPR005139	GO:0006415(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi2g02311	K02835	peptide chain release factor 1

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr10:2673736	Cobi2g02311	Cobi-Chr2:70566309	dispersed
	Cobi	Cobi-Chr2:70566309	Cobi2g01617	Cobi-Chr2:34505546	transposed