Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cobi2g02330 | ATGTCGAAAAACCTGGTGAAATACTCCGTCGTTGACGCCTTTACCGACACGCCGTTCAAAGGAAATCCGGCGGCCGTGTGCTGGCTAGACGGCATACAGAGAGACGATAAGTGGCTGCAGTCAGTTGCTGCTGAATTTAATATCTCTGAGACGTGTTACTTGACTCCGATTCTTAATCATGGTTCAGGAAACCCTAGGTTCAGTCTCAGATGGTTTACTCCTGTAGCTGAGGTGGAGCTTTGTGGTCATGCCACTTTAGCAGCCTCACACTTTCTTTTCCAATCTGGATTGGTGAATTCTAACACAATTGAATTCTCAACCCTATCTGGAATTTTGACTGCCAAAAGAGTTTCAGCTAACAAGATCAATGGTGAATTACAAGACGACTTCTACATAGAATTGGATTTCCCTGTGGTGCCAGTTTCAGATTACAATGATCTCGAGGTTTCTGCAATTTCAGAAATATTAAACGGTGCTTCGGTTGTTGATGTCAAGAAGAACACGCTTGATGATATCTTTGTGGAGCTCTCATCCGCAAAAGAGGTTGAGGAATTCAACCCACAAATTAACAAGATCAAGGAATCCCCGGGTAGAGGGATAGTAATTACAGCACGTGCACCTAACGGCTCGGGGTTTGACTTTTATAGTCGCTTCTTCTGCCCAAAATTAGGAGTTGATGAGGATCCGGTTTGTGGGAGTGCACATTGTGCGTTAGCAGCCTATTGGCATGATAAGTTGGGGAAATGTGATTTTGTGGCATATCAGGCGTCGCCCAGAAGTGGTGTATTACATGTCCATCTTGATAAGGAGAATAAAAGAGTACTTCTTAGAGGCAAAGCCACCACAGTCATGGAAGGATCTCTTTTGGTATAA | 873 | 44.1 | MSKNLVKYSVVDAFTDTPFKGNPAAVCWLDGIQRDDKWLQSVAAEFNISETCYLTPILNHGSGNPRFSLRWFTPVAEVELCGHATLAASHFLFQSGLVNSNTIEFSTLSGILTAKRVSANKINGELQDDFYIELDFPVVPVSDYNDLEVSAISEILNGASVVDVKKNTLDDIFVELSSAKEVEEFNPQINKIKESPGRGIVITARAPNGSGFDFYSRFFCPKLGVDEDPVCGSAHCALAAYWHDKLGKCDFVAYQASPRSGVLHVHLDKENKRVLLRGKATTVMEGSLLV | 290 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cobi2g02330 | 290 | PANTHER | PHENAZINE BIOSYNTHESIS PROTEIN | 6 | 290 | IPR003719 | GO:0003824(InterPro)|GO:0005737(PANTHER)|GO:0009058(InterPro)|GO:0016853(PANTHER) | |
| Cobi2g02330 | 290 | PIRSF | Ismrse-PhzF | 4 | 290 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Cobi2g02330 | 290 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 10 | 286 | - | - | |
| Cobi2g02330 | 290 | Gene3D | Diaminopimelate Epimerase; Chain A, domain 1 | 138 | 278 | - | - | |
| Cobi2g02330 | 290 | NCBIfam | PhzF family phenazine biosynthesis isomerase | 8 | 288 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Cobi2g02330 | 290 | Pfam | Phenazine biosynthesis-like protein | 11 | 286 | IPR003719 | GO:0003824(InterPro)|GO:0009058(InterPro) | |
| Cobi2g02330 | 290 | SUPERFAMILY | Diaminopimelate epimerase-like | 7 | 289 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cobi2g02330 | K06998 | trans-2,3-dihydro-3-hydroxyanthranilate isomerase [EC:5.3.3.17] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Cobi | Cobi-Chr2:71068854 | Cobi2g02332 | Cobi-Chr2:71090049 | proximal |