AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02361 ATGGCATCTGCTGGTTGGAGTTTTCTCAAAGCTCTTGAGAACCCATCATTAGATTCCAACAATCTTGATGATCAAGTTTACGTTCATCCGATGGTCAAACGGTCAACATCCGCACTGAGTACCAAGAGCTTAGAAATGTGTACGGAGAGTTTAGGAAGTGAGACCGGAAGTGATGTTAGTGAAAGTGGTGATGAGTTTTGTGTTGTTTCAATGGAGGAAAGAGAGAGATTCAGAGCAATTCAACGCTCAAAGTGCCGGAATTTTGACCGGAAAGTTCGCCGGAATGACTTCCCGCCACCGTTGACCTCCATCAGCGGCTCCGATGGCGCGGTGAAGGTTAACCATCATAGGGAAGGCGGGCGGTTGGTTATAAAAGCTGTTAGCTTTTTTAACTGTGGTACGCATTTTCAAGAGGAGCGTACAAGCGGTAGGCTTCGCCTTTCGTTGTTGAGGGACCGTTTTGTAAATTATGAAAGTGGAAGGGTGGAAATTGAAAATTATGAAAAAGGTGGTGAAGTGGAATCAGATGAGGAGGAGGGGGTGGTGGCGGTGGTGGCTGAGGAGGATGAGGGCGGTTGGCGGTGGGATATGGACGGAAACCGGTGGCGACTAACCGGAAAAGGAGATCAGATGAAAATGCTAACAAGGTGCAAGGAGGGTGGCAATGGGAACAAAGGGTTTACAAATTGGGGTTCTTGTCGGGTGGCCATTTCTTAA 717 47.84 MASAGWSFLKALENPSLDSNNLDDQVYVHPMVKRSTSALSTKSLEMCTESLGSETGSDVSESGDEFCVVSMEERERFRAIQRSKCRNFDRKVRRNDFPPPLTSISGSDGAVKVNHHREGGRLVIKAVSFFNCGTHFQEERTSGRLRLSLLRDRFVNYESGRVEIENYEKGGEVESDEEEGVVAVVAEEDEGGWRWDMDGNRWRLTGKGDQMKMLTRCKEGGNGNKGFTNWGSCRVAIS 238
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02361 238 Pfam Fantastic Four meristem regulator 96 149 IPR046431 -
Cobi2g02361 238 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 4 236 IPR021410 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02361 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
71424 Cobi2g02361 Cobi4g00732
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:71799886 Cobi9g01434 Cobi-Chr9:55123410 dispersed
Cobi Cobi-Chr1:32088885 Cobi2g02361 Cobi-Chr2:71799886 transposed
Cobi Cobi-Chr1:75345454 Cobi2g02361 Cobi-Chr2:71799886 transposed
Cobi Cobi-Chr2:71799886 Cobi4g00732 Cobi-Chr4:6616370 wgd
Cobi Cobi-Chr2:71799886 Cobi6g01055 Cobi-Chr6:8481403 wgd