AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02371 ATGGCTTCTCTTACACGTGTACTTGAACCACATTTTCCCCATTTTTCCAATTCTACCACTACCACCAACACAAGAAGAAGAAGAAGCCAATTCTCAGTTCTCTCCATGGCGGAATCCAGCCGTCCCACCGTCCTCGTCACCGGCGCCGGCGGTCGAACCGGTCAAATTGTATATAAGAAGCTTAAGGAGAGGTCAGGGGAGTATATTGGTCGAGGTTTGGTTAGAAGTGAGGAGAGTAAGCACAAAATCGGTGGAGCTGACGATGTCTTCATCGGAGATATAACCGATGCCGGAAGTATTATTCCGGCTATTCAAGGCACAGATGCTCTTGTTATCCTTACCAGTGCAGTCCCCAAAATGAAACCTGGGTTTGATCCCACTAAAGGTGGAAGACCTGAGTTCTACTTTGAAGACGGACAGTTTCCCGAACAAGTTGACTGGGAAGGTCAAAAGAATCAAATAGATGCTGCTAAAGCTGCTGGAGTGAAGCACATTGTGCTGGTTGGGTCAATGGGTGGAACGAATATTAACCATCCTTTAAACAGCCTGGGAAACGGGAATATACTGGTTTGGAAGAGAAAGGCTGAGCAATATCTGGCAGATTCTGGGATTCCGTACACGATTATAAGGGCCGGGGGTTTACAAGACAAGGAAGGTGGTGTTCGGGAGCTTCTTGTCGGGAAAGATGATGAGCTTCTTCAGACTGAAACTAAAACCATTGCCCGAGCAGATGTGGCTGAAGTCTGTATCCAGGCGTTTAAATACGAGGAGGCTAAGTTTAAGGCATTTGATCTTGCCTCCAAACCCGAGGGAAGTGGAAACCCGACTAAAGACTTCAAGAGCTTATTTTCCCAGATTACTACTCGGTTTTAA 873 46.62 MASLTRVLEPHFPHFSNSTTTTNTRRRRSQFSVLSMAESSRPTVLVTGAGGRTGQIVYKKLKERSGEYIGRGLVRSEESKHKIGGADDVFIGDITDAGSIIPAIQGTDALVILTSAVPKMKPGFDPTKGGRPEFYFEDGQFPEQVDWEGQKNQIDAAKAAGVKHIVLVGSMGGTNINHPLNSLGNGNILVWKRKAEQYLADSGIPYTIIRAGGLQDKEGGVRELLVGKDDELLQTETKTIARADVAEVCIQAFKYEEAKFKAFDLASKPEGSGNPTKDFKSLFSQITTRF 290
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02371 290 FunFam Uncharacterized protein At5g02240 40 290 - -
Cobi2g02371 290 PANTHER NITROGEN METABOLIC REGULATION PROTEIN NMR-RELATED 37 290 IPR044163 GO:0009507(PANTHER)|GO:0016491(InterPro)
Cobi2g02371 290 Gene3D - 40 290 - -
Cobi2g02371 290 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 42 267 IPR036291 -
Cobi2g02371 290 MobiDBLite consensus disorder prediction 1 27 - -
Cobi2g02371 290 MobiDBLite consensus disorder prediction 12 27 - -
Cobi2g02371 290 Pfam NAD(P)H-binding 48 254 IPR016040 -
Cobi2g02371 290 CDD SDR-a5 43 265 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02371 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:72029894 Cobi9g00876 Cobi-Chr9:21006408 dispersed