AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02377 ATGGTCTCTCTCCGCTTCCCATTCTCGTTTTCTCAGCCACCCTCCGCCGCAAGATTCGCCCGCTCCGTCGCCGTCTCCGCCGCCATCGGTGCCGGAATTTCCGCCGGAATCACCATCTCACAAAACAGCAAGAATCTATCTCTCCAATGCTCCAATTTGTCACGATCTTCTCCCCTATGGGGATCACTGTCTCTCTCCGACGCCGTGGTAACTGAATCGAAGACCGGCGTTTCGTTTCCGGCCGTGTTGAATAACTCGCAGGGGCTTCTGGGGATCGGATTGAGGAAGAAGGCAGTGTTGGGGTTGAAGAACATTGATGTTTACGCTTTTGGTGTGTATGCTGATGATAATGATATAAAGCGGTTTATAAGTGAGAAATACGGAACACTTTCAACAACTGAAGTGAAGAACAAGGATATCACTCAAGATTTGATGGAAAGTGACATTAGTGTTACAGTTAGGCTGCAAATAGTTTATGGGAAACTTAGCATTCGTTCTGTTCGTAATGCGTTTGAAGATTCTGTTGGAAACAGATTGAAGAAGTTTGGTGGATCTGATAACAAGGAGTTACTTCAAAAGTTCACTTCTCAGTTTAGAGATGAATACAAGATTCCTCGTGGATCGATTATAGACCTCTCCAAAGAGAAAGGCTATGTGCTCCGGACTGCTATTGATGGCAAAGAGATAGGAAGTGTCGAGAGCCAACTATTATGTCGGTCAATCTTGGATCTTTACATTGGCGATGACGCATTTGACTCAAAAGCAAAACAAGACATTGATAACAAACTCCTTTCCACCGTTTCAAAGTAA 810 44.81 MVSLRFPFSFSQPPSAARFARSVAVSAAIGAGISAGITISQNSKNLSLQCSNLSRSSPLWGSLSLSDAVVTESKTGVSFPAVLNNSQGLLGIGLRKKAVLGLKNIDVYAFGVYADDNDIKRFISEKYGTLSTTEVKNKDITQDLMESDISVTVRLQIVYGKLSIRSVRNAFEDSVGNRLKKFGGSDNKELLQKFTSQFRDEYKIPRGSIIDLSKEKGYVLRTAIDGKEIGSVESQLLCRSILDLYIGDDAFDSKAKQDIDNKLLSTVSK 269
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02377 269 Gene3D - 118 260 IPR016089 -
Cobi2g02377 269 Pfam Chalcone isomerase like 89 258 IPR016087 -
Cobi2g02377 269 SUPERFAMILY Chalcone isomerase 70 267 IPR036298 GO:0016872(InterPro)
Cobi2g02377 269 PANTHER FATTY-ACID-BINDING PROTEIN 1 1 267 IPR044228 GO:0005504(PANTHER)|GO:0006631(PANTHER)|GO:0009570(PANTHER)
Cobi2g02377 269 Gene3D - 72 245 IPR016088 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02377 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:72179984 Cobi3g02903 Cobi-Chr3:81761357 dispersed