Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Cobi2g02379	ATGGATATCGTGAAACAGGAGATGCTAAAGAAACGGCAAAGCCTTACCGAAGCAACCGGCGGCCGTAAGTTCTTCAAGCGTTCAGAGATCGAACAGAAACGAATCCAGAAGCTTCGCGAAGAAGAAAAACAAGAAGCCGAAGCCAAACGCCTCCGTCAAACCCAAACCCAAACAGACTCCCATCCAAACTCATCCTCAAACCCTAACTCTAAACCCGATTCCATCAAATCCAAATCCGAATCCGGAGCCGGGTCTTCTTCCAAAACCCCAATTAGCGACGAGCAGAAGATAGACTCCCTTAATTTACCCAAACAGGAGGTTATTCGCCGCTTACGCTTTCTCAAACAACCCGTTACTTTGTTCGGTGAGAGTGACGATGACCGGTTGGACCGGTTGAAGTACGTCTTGAAGGCCGGGTTGTTTGAGCTCGACGATAGCGATATGACCGAGGGCCAAACCAATGACTTTTTACGGGATATTGTTGAGTTGAAGAAGCGGCAGAAGTCTGGGATTGTAAGTGATAGGAAGCGCAGGGCGCCTGAGGACTCGACCGAGGATAACGATGGGGGAGGAGGAGGGGAGGATGATGGTAGTGGCGACGGCGGGTCGTCGGGTATGGATCAGGATAAGGATTTTAAGCGGATGAAGGCGAATTTTAACGAGCTTTGTGATGAGGATAAGATTCTCGTGTTTTTTAAGAAGTTGTTGATTGAGTGGAACCAGGAGTTGGATGAGATGAGTGAAGTGGAGAAGAGGACTGCTAAAGGGAAGTCGACGTTTGCTACGTTTAAGCAGTGTGCAAGGTATTTGAATCCGCTCTTCAAGTTCTGCAGGAAGAAGGTTCTGCCTGATGACATTAGACAAGCATTGATGCTAGTGGTGAACTGCTGCATGAAACGGGACTACTTAGCTGCAATGGATCATTACATTCGAATGGCAATCGGGAACGCACCGTGGCCCATTGGGGTTACTATGGTTGGTATCCATGAGCGTTCAGCTCGTGAAAAGATTTACACCAACAGTGTGGCTCACGTGATGAATGACGAAACAACTAGAAAATATTTGCAGTCGGTTAAACGGTTAATGACATTTTGTCAAAGGCGGTATCCAACAATGCCTTCAAAGGCGGTGGAGTTTAATAGTTTGGCAAATGGTAGTGATTTGCAGGCTTTATTGGCAGAAGAAAGAAGGAACACAGCAGGTGGAAGTCAACAGCAAGAAGATAGACTTATGTTGATGCCACCACCAAAGGATGACTAG	1260	47.14	MDIVKQEMLKKRQSLTEATGGRKFFKRSEIEQKRIQKLREEEKQEAEAKRLRQTQTQTDSHPNSSSNPNSKPDSIKSKSESGAGSSSKTPISDEQKIDSLNLPKQEVIRRLRFLKQPVTLFGESDDDRLDRLKYVLKAGLFELDDSDMTEGQTNDFLRDIVELKKRQKSGIVSDRKRRAPEDSTEDNDGGGGGEDDGSGDGGSSGMDQDKDFKRMKANFNELCDEDKILVFFKKLLIEWNQELDEMSEVEKRTAKGKSTFATFKQCARYLNPLFKFCRKKVLPDDIRQALMLVVNCCMKRDYLAAMDHYIRMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHVMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQALLAEERRNTAGGSQQQEDRLMLMPPPKDD	419

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Cobi2g02379	419	Gene3D	Functional domain of the splicing factor Prp18	203	373	-	-
	Cobi2g02379	419	MobiDBLite	consensus disorder prediction	169	210	-	-
	Cobi2g02379	419	MobiDBLite	consensus disorder prediction	1	98	-	-
	Cobi2g02379	419	SMART	pr04-2	102	154	IPR014906	-
	Cobi2g02379	419	MobiDBLite	consensus disorder prediction	169	185	-	-
	Cobi2g02379	419	FunFam	Pre-mRNA-splicing factor 18	202	373	-	-
	Cobi2g02379	419	MobiDBLite	consensus disorder prediction	394	419	-	-
	Cobi2g02379	419	Gene3D	-	76	155	IPR036285	-
	Cobi2g02379	419	SUPERFAMILY	PRP4-like	93	137	IPR036285	-
	Cobi2g02379	419	PANTHER	PRE-MRNA SPLICING FACTOR-RELATED	1	382	IPR039979	GO:0000350(PANTHER)\|GO:0005682(PANTHER)\|GO:0008380(InterPro)\|GO:0046540(PANTHER)\|GO:0071021(PANTHER)
	Cobi2g02379	419	SUPERFAMILY	Functional domain of the splicing factor Prp18	206	371	-	-
	Cobi2g02379	419	Pfam	pre-mRNA processing factor 4 (PRP4) like	107	134	IPR014906	-
	Cobi2g02379	419	MobiDBLite	consensus disorder prediction	22	54	-	-
	Cobi2g02379	419	MobiDBLite	consensus disorder prediction	55	98	-	-
	Cobi2g02379	419	Pfam	Prp18 domain	230	371	IPR004098	GO:0005681(InterPro)\|GO:0008380(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Cobi2g02379	K12817	pre-mRNA-splicing factor 18

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Cobi	Cobi-Chr2:72197516	Cobi9g02363	Cobi-Chr9:68024118	dispersed