AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02385 ATGGGATACCCTGGATCTCCCGAACGACGTCGTCGCAACCGTAATCAAAACCCTAATTACTCACCTGAACATGACGCTCCGACCGACCGGAGGAACCGCAGTTCTCGCCGGAGTCCACCGTATTCAAGGTACGATAACGATTCCAATCGCCGTCGTTCTCCTGATTATTCTAGATTTAATCATCAAAATCGTAGCTTTAGCCGTAGTCGTAGTCGTAGTCCTGATTATAGCCGGTACGATAATCAAATTAGTTACCGCCGGTCACCTGATTATTCTAGATCTAGAAGAAGCCCTAGCCCTAGGGTTGAAAAGATAAATCAGAATAGGAAACCCAACTATGGGGATAGGAATAAGCAGTATCTCGACCGCGGTAATGGTAACCGTAATGGTACCGAGTCAGATTCCGATGAGGAGTTGAAAGGATTGAGTTATGAAGAGTATAGGAGGTTGAAAAGGCAGAAGATCAGGAAGATGTTGAAGAATTGTATATGGAATGTCACGCCCAGTCCCCCGAGAGTTGATGGTGATTTTGATGAGGTTGAGTTTGAGGAAAGTGAAGAGAAGGATGTTGTTGACGAGAAGTCGGAATTGGATTCGAAGGCGAGGGGTGGATTGTCTGAATCAGAGTCGGAGTCGGAATCTGAGTCGGATTCGGATGACTCGGTGTCGGATTCGGATGATTCCAGATCGAGGAGGAAGAAGAAGAGCAAGAGTTCTAGGTCTAGGTCTAGAAGAAAGAGATCTGTGTCGGTTAGTGAGAGCGAGTCGGATTATTCGACCGATGATTCTGAAGAAGAATATAGGAGGAAGAAGAAGAAAAAGTCAAAGAGATCCACAAAACGAAAGAGTAGCAGTAGGAGAAGCAGTAAAAGGAAGAGAAGAAGTAGTTCAAGAAGAAGAAGAAGAAGTAAAGATAGTGATTCTGAAGAAAATAGTGAGAGTGATGGAGGCAAAGAATCGTTGAAATCTAAAAGAAGTCACAGATCTTCTTCAAAATCGTCAGATGAGAATTCTGATTCTGAAAAAGATATAAAAACTAAACCTAAGGTGGACGATTTGGAGAAACCAGAAACAGATAGCGAGTTGCTAATGTTCAAAGAAATGATTGAGTCAAGAAAGAAGCTTGCTTTAGATGAGGAACCCGAGGTGGGACCCATGCCTTTACCAAGAGCTGAAGGTCATATAAGCTATGGTGGTGCATTGAGGCCTGGTGAAGGTGATGCAATTGCACAATATGTGCAGCAAGGGAAACGTATCCCAAGAAGAGGAGAAGTTGGTCTATCGGCTGATGAGATTAGCAAGTTTGAAGATCTTGGTTATGTTATGAGTGGTAGTAGGCATCAAAGGATGAATGCTATTCGTATCAGGAAAGAAAATCAAGTTTATAGTGCTGAAGATAAGCGGGCTTTAGCTATGTTTAACTATGAAGAAAAAGCGAAGCGGGAACAGAAAGTTATGGCTGATTTGCAACGGTTGGTGCAACGCCACATTGGAGAAGATTCAGGCCCTTCTCATGATCCGTTTGGTGGGAAAGCAACCGAGGACCCTGATGCTTGA 1557 43.67 MGYPGSPERRRRNRNQNPNYSPEHDAPTDRRNRSSRRSPPYSRYDNDSNRRRSPDYSRFNHQNRSFSRSRSRSPDYSRYDNQISYRRSPDYSRSRRSPSPRVEKINQNRKPNYGDRNKQYLDRGNGNRNGTESDSDEELKGLSYEEYRRLKRQKIRKMLKNCIWNVTPSPPRVDGDFDEVEFEESEEKDVVDEKSELDSKARGGLSESESESESESDSDDSVSDSDDSRSRRKKKSKSSRSRSRRKRSVSVSESESDYSTDDSEEEYRRKKKKKSKRSTKRKSSSRRSSKRKRRSSSRRRRRSKDSDSEENSESDGGKESLKSKRSHRSSSKSSDENSDSEKDIKTKPKVDDLEKPETDSELLMFKEMIESRKKLALDEEPEVGPMPLPRAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSADEISKFEDLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKAKREQKVMADLQRLVQRHIGEDSGPSHDPFGGKATEDPDA 518
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02385 518 Coils Coil 472 492 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 7 58 - -
Cobi2g02385 518 PANTHER NF-KAPPA B ACTIVATING PROTEIN 8 504 IPR040466 GO:0005634(PANTHER)|GO:0010468(PANTHER)
Cobi2g02385 518 MobiDBLite consensus disorder prediction 270 300 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 1 144 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 376 399 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 59 88 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 177 191 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 493 518 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 89 117 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 301 363 - -
Cobi2g02385 518 Pfam NF-kappa-B-activating protein C-terminal domain 396 494 IPR009269 GO:0003682(InterPro)
Cobi2g02385 518 MobiDBLite consensus disorder prediction 192 209 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 129 144 - -
Cobi2g02385 518 MobiDBLite consensus disorder prediction 161 363 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02385 K25931 NF-kappa-B-activating protein