AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02426 ATGGTGTTGACGGCCGAATCATTAGCGACACCAACATCGACTACTTGTTTTGATGATGGAAGCTACAAGACGGCAACGCGAAGGGTAGCAAAATCTTCACATTCTGACACACCAAACCCGCCTTTGTACATTGTATATCCTACAGAAAAAGGAACTTATCCCGTTATACTCTTTCTCCATGGCTTTTCCACCCCTAATACCTGTTATACCGACCTGTTTGAGTTTATTGCCTCCCATGGCTACATTATTGTCGCTCCTGGACAAACTTTGATTGAGCTCTTAAAGGGTCTATGTGTATTTTCCGCGATTGGTGATGTGGACAGTGCGGCCGAAACAGGCAATTGGATAGACAAAAACCTCCAAAGTGTACTCCCAAATGATGTATCACCGGATCTTGAGAATGTAGCACTAGCTGGCCATAGCAAAGGAGGAAAAGCAGCGTTTGCACTAGCTTTAGGTCATGCTAATACAAGCCTTAAGTTCAAGGCTCTTATTGGTTTAGATCCTGTTGCAGGCCGAGATACATCTAGCAGACTCGAACCAAAAATCTTAAACTACATCCCCCAAAATTTCAACATCTCTTTGCCTATCGCTCTAATTGGGACAGGCTTAGGTGATGATGGGTGTTGCGGGTGTTTTCCCCCCGCAGCCCCTTGGGGATGTAACCATCCTTTTTTCTTTAACGAATGCAAACCCCCTACTTGTTATTTTGTAGCTAAGGACTTTGGTCACATGGACATGGTTGATGATTGGTTGGTTAGGTTGTCGGGTATGTTTGTGTGCAAGACTGGGAAGGGTTCATGTGCGGATATGAGAAGAGCTTGTGGAGGCATTATTGTTGCCTTTCTCAAGACTTACATGTTTAACGAACCCGAAGATCTCACTGCGATCATTGATTCACCGAGTTCGTTTGCTCCAATAAAGCTCGATCCAGTTTTGTGGCTTCAATCTTGA 954 44.44 MVLTAESLATPTSTTCFDDGSYKTATRRVAKSSHSDTPNPPLYIVYPTEKGTYPVILFLHGFSTPNTCYTDLFEFIASHGYIIVAPGQTLIELLKGLCVFSAIGDVDSAAETGNWIDKNLQSVLPNDVSPDLENVALAGHSKGGKAAFALALGHANTSLKFKALIGLDPVAGRDTSSRLEPKILNYIPQNFNISLPIALIGTGLGDDGCCGCFPPAAPWGCNHPFFFNECKPPTCYFVAKDFGHMDMVDDWLVRLSGMFVCKTGKGSCADMRRACGGIIVAFLKTYMFNEPEDLTAIIDSPSSFAPIKLDPVLWLQS 317
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02426 317 PANTHER CHLOROPHYLLASE-2, CHLOROPLASTIC 9 313 - -
Cobi2g02426 317 Pfam Chlorophyllase 13 310 IPR017395 -
Cobi2g02426 317 SUPERFAMILY alpha-beta-Hydrolases 37 186 IPR029058 -
Cobi2g02426 317 Gene3D alpha-beta hydrolase 9 303 IPR029058 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02426 K08099 chlorophyllase [EC:3.1.1.14]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:73232928 Cobi4g01400 Cobi-Chr4:13855594 dispersed