AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cobi2g02445 ATGGCTTCTTCGATGCTATCCGGAGCTCATCAACTCTCATTACCCTCAAACAGCTTACGATTCAACAAACCCATTTCACAAAGAACCAATTTCACTTTACCCAATTCCAATCTCCGATCCAAAACCCTAATTTCGCCCAAATGCAGCGTCTCCGTACGGCCAGCTTCACAGCCCCGATTCATACAGCACAAAAAGGAGGCATTTTGGTTCTATAGGTTTTTATCAATTGTGTATGATCATGTGATAAACCCTGGGCATTGGACCGAGGATATGCGAGACGATGCGCTTGAGCCGGCGGAGCTTAATGATAGGGGTTTGGTGGTGGTGGATGTTGGTGGTGGTACTGGCTTTACCACTTTGGGGATTGTGGAATGTGTTGATGCTAAAAATGTGACTATTTTGGATCAGTCGCCGCATCAGCTTGCTAAGGCGAAAGAGAAGCCCCCTTTGAAGGACTGCACGATTGTTGAGGGGGATGCCGAGGATCTCCCGTTTGAAACCGATTATGCCGATCGTTATGTGTCGGCTGGAAGCATTGAATACTGGCCCGACCCGCAACGAGGCATTAAAGAAGCATACCGGGTCATAAAGAAAGGCGGGAAAGCTTGTTTAATTGGTCCTGTATATCCAACATTTTGGTTGTCTCGGTTCTTTGCAGACATGTGGATGTTGTTTCCAAAGGAAGAAGAATACATGGAGTGGTTTGAGAAGGCGGGATTCAAAGACGTGCAAATTAAGAGGATCGGCCCACAATGGTATCGTGGGGTCCGCCGCCACGGTCTCATCATGGGATGCTCGGTTACAGGTGTCAAACCCGCATCTGGTGACTCTCCACTGCAACTTGGTCCTAAAGTGGAGGATGTAGAAAAGCCCGTGAACCCGCTTGTATTTCTTGTGCGGTTTCTTCTTGGAGCCTCGGCTGGAGTGTACTATGTATTGGTTCCTATCTACATGTGGCTCAAGGACCAGATGGTGCCAAAAGGTCAACCAATCTGA 996 48.09 MASSMLSGAHQLSLPSNSLRFNKPISQRTNFTLPNSNLRSKTLISPKCSVSVRPASQPRFIQHKKEAFWFYRFLSIVYDHVINPGHWTEDMRDDALEPAELNDRGLVVVDVGGGTGFTTLGIVECVDAKNVTILDQSPHQLAKAKEKPPLKDCTIVEGDAEDLPFETDYADRYVSAGSIEYWPDPQRGIKEAYRVIKKGGKACLIGPVYPTFWLSRFFADMWMLFPKEEEYMEWFEKAGFKDVQIKRIGPQWYRGVRRHGLIMGCSVTGVKPASGDSPLQLGPKVEDVEKPVNPLVFLVRFLLGASAGVYYVLVPIYMWLKDQMVPKGQPI 331
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cobi2g02445 331 CDD AdoMet-MTases 128 205 - -
Cobi2g02445 331 Pfam Methyltransferase domain 109 203 IPR013216 GO:0008757(InterPro)
Cobi2g02445 331 ProSiteProfiles MPBQ-MBSQ family SAM-binding methyltransferase profile. 59 268 IPR031164 GO:0032259(InterPro)
Cobi2g02445 331 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 65 250 IPR029063 -
Cobi2g02445 331 Gene3D Vaccinia Virus protein VP39 71 262 IPR029063 -
Cobi2g02445 331 PANTHER 2-METHYL-6-PHYTYL-1,4-HYDROQUINONE METHYLTRANSFERASE, CHLOROPLASTIC 1 331 IPR044649 GO:0051741(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cobi2g02445 K12502 MPBQ/MSBQ methyltransferase [EC:2.1.1.295]
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Event-related genes

Select Gene_1 Gene_2 Event_name
71441 Cobi2g02445 Cobi4g00763
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Cobi Cobi-Chr2:73510532 Cobi4g00763 Cobi-Chr4:6859504 wgd